Gene Swit_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2552 
Symbolaat 
ID5196559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2836625 
End bp2837371 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content71% 
IMG OID640582108 
Productleucyl/phenylalanyl-tRNA--protein transferase 
Protein accessionYP_001263049 
Protein GI148555467 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2360] Leu/Phe-tRNA-protein transferase 
TIGRFAM ID[TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.1817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGA TCGATCCCGA CCTGCTGCTG AGAGCCTATT CGATCGGGGT CTTCCCGATG 
GCCGACAGCC GTGCCGCCGA CGACGTCTAC TGGGTCGAGC CGAAGAAGCG CGGCATCCTG
CCGCTCGACC ATTTCCGCCT GTCGCGATCG CTCGCCAAGA CGATCCGCTC GGACCGCTTC
GCCGTCACCG CCGACCGGGC GTTCGGCGAG GTCGTGGCGG AATGCGCGGC GGTCACCAGC
CAGCGGCCCG ACACCTGGAT CAACCCGGCG ATCGAGGCCG CCTATGCCGA CCTCCACCGC
CGCGGCCACG CCCATTCGAT CGAGTGCTGG CGCGAGGGGC GGCTGGTCGG CGGGCTCTAC
GGCGTGCGGC TGGGCGGCGC CTTCTTCGGC GAGAGCATGT TCAGCCGCGA GAGCAACGCG
TCGAAGGTCG CGCTCGCCTG GCTGGTCGCG CGGCTCCGGG CCGGCGGCTT CCGGCTGCTC
GACTGCCAGT TCATCACCGA TCACCTCCAG TCGCTCGGCG CGATCGAGGT GAGCCGCGAC
GATTATGTCG CGCTATTGGA CGTCGCGCTG GGCGTGGTCG CCGGGGCGGG AGCGGCCGGC
GGCGTCGCGG TCGCGGGGGC CGCGGCGGGC TGGTCGGCGC CCGACTTCTT CGCGCTCGAC
GGCGGCGCGA CCGATCCCGA CACGCGCACC GTGTCGGGGC CGATATCGGG ATGCACCATC
GTGCAGCTCT TGGGCCAGAC GTCGTAG
 
Protein sequence
MKAIDPDLLL RAYSIGVFPM ADSRAADDVY WVEPKKRGIL PLDHFRLSRS LAKTIRSDRF 
AVTADRAFGE VVAECAAVTS QRPDTWINPA IEAAYADLHR RGHAHSIECW REGRLVGGLY
GVRLGGAFFG ESMFSRESNA SKVALAWLVA RLRAGGFRLL DCQFITDHLQ SLGAIEVSRD
DYVALLDVAL GVVAGAGAAG GVAVAGAAAG WSAPDFFALD GGATDPDTRT VSGPISGCTI
VQLLGQTS