| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2513 |
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| Symbol | |
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| ID | 5198189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2789506 |
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| End bp | 2790630 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582061 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001263010 |
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| Protein GI | 148555428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT TTCCCGACGT CGATACGCTG CGGCTGTGCA GCATGCTGAC CTCGACCGCG
TTCGGGCTGG TGTTCTGCGC GCTCTGGCTG CGCGACCGGA CGGAGGGCCA TCTGCTCTTC
TGGGCCGCCG GTTCGCTGCT CTACGGCGCC GTCATGTTCA GCTTCAGCCT GACGCCGCCC
AATGCCGTCG CCGTCACCAT GCCGCTCTTC GCGCTGCTCT CGCTGTGCAA CGTGCTGCCG
CTGGCGGGTG CCCGCCGACT CGACGGCAGG CCGCCCTTCG CCTGGTGGAT GCTGATCCCG
ATCGTCGCGG CCGGGGCGGG CCATGGCCTG CCCCGGCTGG CGGTCGCCCA GGGCTGGCTG
CCGGCGGCGA GCCTGCTGCC CAATATCGGC GACGCGCTCG GCCTGTCGCT GTCGATCGCG
ATCAACGGCG GGATGCTGCT GTGGGGCCGC TGGACGGTGC GGACGGCGGG CCATCGCATC
GCGGGCGCGG GGCTGCTCGC CTATATTCCG GGCTTCCTCC TGTCGATCGC GGGCGAATAT
CATGTGCTGC GCGGGATGGA GTCGCTGGCG CTGCTCGCCA TGCTGTCGGA CCAGGCCCTG
CTCGGCATCA TCAACCTCGG CCTGCTCGCC ATCCCGGTCG AACGCGCGGA GCGGCAGTTG
CGGCAGGCGG CGCTGCGCGA TCCGCTGACC GGCGCCTGGA ACCGCGCCGG GCTGGAGGCG
CAGAAGCCGC GCTTCCTGAC GCCCGGCGTC GCCGCGATCG CGATCGACAT CGATCATTTC
AAGGCGATCA ACGATCGCCA CGGCCATGCC GCGGGCGACG CGGTACTGGC GCTGTTCGGC
CGCGAGGCGG GTCGGCTGTC GCAGGCCGGC GGCGGCGAGC TGTTCCGGCT GGGCGGCGAC
GAGTTCGCGA TCCTGCTGCC CGCCGGCGGC CCCGATCCCG GCCGCTTCGC CGAGCGGCTC
CGCGCCCATC TCCAGTCCCA TGCCGACGAC GCGGTCGGCT GGACCGTCAG CATGGGCATG
GCGTCGGTGC TCGACGGCGA ACGCGACGTC GACGCGGCGC TGCACCGTGC CGACGGCTCG
CTCTACCAGG CCAAGGCCGA GGGGCGCGGC ATCATCGCGG CCTGA
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| Protein sequence | MPIFPDVDTL RLCSMLTSTA FGLVFCALWL RDRTEGHLLF WAAGSLLYGA VMFSFSLTPP
NAVAVTMPLF ALLSLCNVLP LAGARRLDGR PPFAWWMLIP IVAAGAGHGL PRLAVAQGWL
PAASLLPNIG DALGLSLSIA INGGMLLWGR WTVRTAGHRI AGAGLLAYIP GFLLSIAGEY
HVLRGMESLA LLAMLSDQAL LGIINLGLLA IPVERAERQL RQAALRDPLT GAWNRAGLEA
QKPRFLTPGV AAIAIDIDHF KAINDRHGHA AGDAVLALFG REAGRLSQAG GGELFRLGGD
EFAILLPAGG PDPGRFAERL RAHLQSHADD AVGWTVSMGM ASVLDGERDV DAALHRADGS
LYQAKAEGRG IIAA
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