| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2507 |
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| Symbol | |
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| ID | 5199906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2782148 |
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| End bp | 2784676 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582055 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001263004 |
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| Protein GI | 148555422 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACCA TCCTCCTGAC CGGCGCCGCG GCGCTGGCCC TCGCCACCCC TGCCCTGGCC
GTCGCGGCCG AAGCGCCCGC CGACATCGTC GCGCCGCCCG CCGACGACGC GGCGGCGGAC
GGCGGGACGA TCATCGTCAC CGGCACCCGC AGCCGCAGCG TCCGCACCGT CGCCGACAGC
CCGGTGCCGA TCGACGTGAT CGAGCCGGCC GAGTTGAAGG CGACCGGGCG CACCGGCCTG
AAGGAGGTGC TCGGCCAGAT CGTGCCGTCG CTGACCATGC CCGCGCTCGG CGGCGGCGGC
ACGTCCGCCA GCGTGCGGCC GATCTCGATC CGGGGCCTGT CGGGCGACTA TCTGCTGGTG
CTGGTCAACG GCAAGCGGCG GCACACCACC TCGCTGATCA ACAACCTCTC GCGCATCTCG
GGCGGCTCGA CGCCGGTCGA CATCGACCTG ATCCCGACCA ACGCGGTCGG CCGGATCGAG
GTGCTGCGCG ACGGCGCCGC CGCCCAATAT GGATCGGACG CGATCTCCGG CGTGATCAAC
ATCATCCTCG ACGATTCGCC CGAGGGCGGC GAGTTCAGCT CGACCGCCGG GCAGCTCTAC
GAGAAGGGCG GCGCGCTGCT CCAGCAGCAG ATCGGCTATG GCACGCGGAT CGGCGACGGC
GGCTTCGTCC GCTTCGCGGT CGAGGGCAAA TATCACGACC GCGCCGACAG CTCGGCCGAG
CCGGTGCCCT ATATCTACCC CTTCATCAAC GGCGCGCCCG ACCCGCGCGA GGCCAATGCC
GATCACCTGA TCGCCGGCGG CTATGGCCGG TCGAACCGCG ACAAGATCAT CAACGGCTCG
CTCAACGCCG AGCTGCCGGT CGGCGACGCG CTCAAGCTCT ACGGCTTCTC GACGCTCAGC
TATCGCGACA TCGACGACAA GCGCGGCTCG GCCTTCGCCG CGCCGACCGG CTATGGCGGC
CTCGCCAACG TCCAGGGCCA GACCGTGCTG CCGCAGGTCT ATCCGTCGGG CTTCCAGGCG
CGCCGGCGCA TCCGCGAATG GGACGGGCAG GGGACGCTGG GCCTGAAGGG GACGATCGGC
GCCTGGGACT TCGACGTCTC GTCGAGCTAT GGCCGCGACC ATGTCCGGCT CGGCGCGGTC
GGCACGCTCA ACCCCTCGCT CGGGCCGTCG AGCAAGACCA GCTTCTTCAT GGGCAAGCAG
GTCCAGGCGC TGTGGGTCAA CAATGTCGAT CTCAGCCGCG ACTACGACAT CGGCCTGGCC
GAGCCGCTGT CGGTCGCGGT CGGCGTCGAG CATCGCTGGG AGAAGTTCCA GAACATCGCC
GGGGAGCCCG ACAGCTATCG CGACGGCGGC TATGTGATCC CGGCCGACGG CACCCCCTTC
GGACAGCTCT ATGGCGGGCG ATCGCCGTCG CCGGGGCTGG TCTCCTTCAC CGGCACCTCG
CCGGCCGACC AGAGCTCGAT CAGCCGCAAC AACCTGGCCG CCTATGTCGA CCTGTCGACC
AGCATCACCA GGGGCTGGTT CGTCGGCGTG GCGGGGCGGT TCGAGCATTA TGACGACAGC
GCGGGCGACA CCGTGTCGGG CAAATTCTCG ACCCGCTACG AGATCGCCCC CGGCTTCGCG
CTGCGCGGCG GCGTCAACAC CGGCTTCCGC GCGCCGTCGC TGGCGCAGAC CGCCTTCTCG
ACGACGCAGA ACACGGTGAC GGTGATCGGC AACAACCGGG TCAGCACCAT CTCCAAATTC
CTGCCGGTCA ACAGCATCGC CGCGCTGGCG CTGGGGGCGA AGGCGCTCAA GCCCGAAAAG
TCGCTCAACT TCACCGGCGG CTTCACCTTC GAGCGGGGGC CGGCGCGGCT GACCGTCGAC
GCCTATCAGA TCCGGGTCGA CGACCGCATC GTCAAGACCG AGTTCCTCGG CACGGCCTCC
AACGGCGGCA CCGCGATCCG CGACATCCTG ATCGCCAACG GCGTCGCCAA TGTCGACAGC
GCGCAATTCT TCACCAACGC GATCGACACG CGCACGCGCG GCGTCGACGT GGTGGCCGAA
TATACGGTGC GCACCGCCGG GCTCGGCAGC TTCCGGCTCA ACGCGGCCTA CAGCTACAAC
AAGACGAAGA TATTGAAGGT CATCGACAAT CCGGCGCAGC TCGCGCCGCT CAACGTCACC
CTGTTCGGCC GCCAGGCGCA GCGCGACCTG GTCGCGGCGC TGCCGCGCAC CAAGCTGGTG
CTGTCGAACG ACTGGAGCCT CGACCGCTTC CACGCGCTGC TCCGCGTCAC GCGCTACGGC
AGCTACGTCG AATCGAGCAA CGTCGCGAGC GGCGACCGGC GGTTCGGCGC GAAATGGGTC
ACCGACCTCG ACGTCAGCTA CGAGCTGAGC GAGCGGGTGA CGCTGTCGGC GGGCGCCAAC
AACCTGTTCG ACGTCTATCC CGACCGCAAC GGGCTGATCG CCTATGACGG ATCGGGCGCC
TATGGCAATT TCGCGCCGTT CGGTCTCAGC GGCGGCTTTT ATTATGGGCG CGTTTCGGTC
AAATTCTGA
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| Protein sequence | MKTILLTGAA ALALATPALA VAAEAPADIV APPADDAAAD GGTIIVTGTR SRSVRTVADS
PVPIDVIEPA ELKATGRTGL KEVLGQIVPS LTMPALGGGG TSASVRPISI RGLSGDYLLV
LVNGKRRHTT SLINNLSRIS GGSTPVDIDL IPTNAVGRIE VLRDGAAAQY GSDAISGVIN
IILDDSPEGG EFSSTAGQLY EKGGALLQQQ IGYGTRIGDG GFVRFAVEGK YHDRADSSAE
PVPYIYPFIN GAPDPREANA DHLIAGGYGR SNRDKIINGS LNAELPVGDA LKLYGFSTLS
YRDIDDKRGS AFAAPTGYGG LANVQGQTVL PQVYPSGFQA RRRIREWDGQ GTLGLKGTIG
AWDFDVSSSY GRDHVRLGAV GTLNPSLGPS SKTSFFMGKQ VQALWVNNVD LSRDYDIGLA
EPLSVAVGVE HRWEKFQNIA GEPDSYRDGG YVIPADGTPF GQLYGGRSPS PGLVSFTGTS
PADQSSISRN NLAAYVDLST SITRGWFVGV AGRFEHYDDS AGDTVSGKFS TRYEIAPGFA
LRGGVNTGFR APSLAQTAFS TTQNTVTVIG NNRVSTISKF LPVNSIAALA LGAKALKPEK
SLNFTGGFTF ERGPARLTVD AYQIRVDDRI VKTEFLGTAS NGGTAIRDIL IANGVANVDS
AQFFTNAIDT RTRGVDVVAE YTVRTAGLGS FRLNAAYSYN KTKILKVIDN PAQLAPLNVT
LFGRQAQRDL VAALPRTKLV LSNDWSLDRF HALLRVTRYG SYVESSNVAS GDRRFGAKWV
TDLDVSYELS ERVTLSAGAN NLFDVYPDRN GLIAYDGSGA YGNFAPFGLS GGFYYGRVSV
KF
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