| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2493 |
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| Symbol | |
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| ID | 5197779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2767813 |
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| End bp | 2769123 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640582041 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001262990 |
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| Protein GI | 148555408 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0697139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA GCCCTTCCGC GAGTCTTCCC GCCCATCAGG GCGGCGCGGT CTTCGCGCGG
ATGGGGCGCA ACCTCGCCTG GCTGCTCGGC GGGCGCGGCT TCCAGGCGGT GGCGAGCCTG
CTCTATCTCG GCCTCGCCGC GCGCACCCTC GGCCCCGCCC GCTTCGGCGA GTTCACCCTG
GTGCTCGCTT ATGGCCAGGC GATCGCCAAC GTCGCGCAGT TCCAGTCGTG GCAGACGGTG
ATCCGCTACG GCACCATCCA CATCGCCGCC GGCGCGCGCG ACCGGCTCGG CCGGCTGCTC
GGCCTCACCA CCCTGTTCGA CGGCGGCGGG GCGATCCTCG GCGCGATCGT CGCGGCGGCC
GGGGTCGCGC TCGCCGCCGG CTGGCTCGGC TGGGACGCGG CCGAGCGGGG CCGCGCGGCC
TGGTTCGGGG TCGCGCTGCT GCTGTCGATC GGCGCGACGC CGACCGGCAT GCTGCGCCTC
GTCGACCGCT TCGACCTCAC CACCTGGTGC CAGGCGGTCG GCCCGCTGGT GCGGTTGGCG
GCATCGATCG CCGCCTGGGC GACCGACGGC GGCATCGGTC TGTTCCTGGC CGGCTGGGCG
GCGGCCGCGC TGCTCCAGCA TGGCGCGACC TGGTTCGCGG CGCTGACCCG AACCGGCCTG
CCGGTCGCTA TCGGCTGGCG GCGCGCCGGG CGGGCGGTGC GCGAGAATGA GGGCATCTGG
CGCTTCGCCC TCACCACCAA CGCGGCGGGC ACGGTCGGCC TGCTCGGCGA GCAGCTCGCG
ACGCTCGCGG TCGGCGGCGC GGCGGGGGCG ACCGCGGCGG GCGGCTTCCG CATCGCCAGC
AAGGTCGCCC GCGCGCTCGC CAAGCCGATC CAGATCGCCG CGCGCGTCCT CTATCCCGAG
CTCGCCCGGC TCCACGCCAG CGCCGACCAT GCCACGCTCG ACCATGTCAT GGCGCGGGTG
TCGCGCTATG CGATCGGCCT GTCGCTGGCG GTGGTCGTCG TCGCGCTGGC GGGCGGCGGT
CTGCTGATCG GGCTGATCGC CGGCCCCGGC TACGGCTTCG CGCGCGACAT GCTGGCGGTG
ATGGCGATCG GCGTCGCGAT CGACCTGTCG GGCTTCGCGC TCGAACCGCT GCTGGTCGCG
CGCGGCCGGG CGGGAACGGT GCTCGCCATC CGTGTCGCCG GCACCCTCCT GCTCGGGCTG
CTGGTCGCGT TGCTGCTGCC GACCCTCGGC GCGATGGCGG CGGCGGTCGC GACGGTGGCG
GCGTCGCTGG CGATGCGGGT CGCGCTGGGT CGGGCGGCAG CGGTGCAATA G
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| Protein sequence | MTASPSASLP AHQGGAVFAR MGRNLAWLLG GRGFQAVASL LYLGLAARTL GPARFGEFTL
VLAYGQAIAN VAQFQSWQTV IRYGTIHIAA GARDRLGRLL GLTTLFDGGG AILGAIVAAA
GVALAAGWLG WDAAERGRAA WFGVALLLSI GATPTGMLRL VDRFDLTTWC QAVGPLVRLA
ASIAAWATDG GIGLFLAGWA AAALLQHGAT WFAALTRTGL PVAIGWRRAG RAVRENEGIW
RFALTTNAAG TVGLLGEQLA TLAVGGAAGA TAAGGFRIAS KVARALAKPI QIAARVLYPE
LARLHASADH ATLDHVMARV SRYAIGLSLA VVVVALAGGG LLIGLIAGPG YGFARDMLAV
MAIGVAIDLS GFALEPLLVA RGRAGTVLAI RVAGTLLLGL LVALLLPTLG AMAAAVATVA
ASLAMRVALG RAAAVQ
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