| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2492 |
|---|
| Symbol | |
|---|
| ID | 5197778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2766258 |
|---|
| End bp | 2767772 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640582040 |
|---|
| Product | malonyl-CoA synthase |
|---|
| Protein accession | YP_001262989 |
|---|
| Protein GI | 148555407 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.318474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC TCTACTCGCG CCTTGCCGCC GGCTTTCCCG ATCCCGCCAC CCCCTTCGCC
CATCTGCCCG ACGGCAGCGT CGTGACCTAT GGCGACGTCG ACAAGCGATC GGCGGCCTTC
GCGCACCTGC TGCGCGGGGC GGGCGTCGGC GTCGGCGACC GGGTCGCGGT GCAGGCGGAG
AAGAGCATCG ACATGCTGAT GCTCTATCTC GGCGCGCTGC GGGCGGGGGC GGTGTTCCTG
CCGCTCAACA CCGCCTATAC GGCGGGCGAG CTCGACTATT TCATGCGCGA CGCCGAACCC
GCGCTGTTCG TCTGCGATCC GGCGGCGCTG CCGGCGGTCG CCCCGCTCGC CGAGGCGGCG
GGCGTGCCGC GGGTCGAGAC GCTCGGCGCC GACGGCGGCG GCAGCCTCGC CGCGCTGCTC
GCCGGCCGGC CCGAGAGCTT CGACGATGTC GCGCGGGACG ACAAGGACCT CGCCGCGATC
CTCTACACCT CGGGCACGAC CGGCCGCTCG AAGGGGGCGA TGCTGAGCCA CGACAATCTC
GGCTCCAACG CCTTCACGCT GCGCGAGGCC TGGGCCTTCG GCGGCGGCGA CGTGCTGCTC
CACGCGCTGC CGATCTTCCA CACCCACGGC CTGTTCGTCG CGACCAACAC GATCCTGGCG
GCGGGCGCGT CGATGATCTT CCTGCCGAAG TTCGATGCGG CCGAGGTGCT GCGCCGGCTG
CCGCGCGCGA CGGTGATGAT GGGGGTGCCG ACCTTCTATA TCCGCCTGCT CGACGAGGCC
GGCTTCACCC GCGACCATGT CGCGCACATG CGGCTGTTCG TGTCGGGATC GGCGCCGCTG
TCGGCCGACA TTCACCGCGA GTTCCGCGAG CGCACCGGCC ACGCCATCCT CGAACGCTAC
GGCATGACCG AGACCAACAT GAACATCTCC AACCCCTATG ACGGCGATCG GATCGCCGGG
ACGGTGGGCT TCCCGCTGCC CGGCGTGTCG ATCCGCATCG CCGATCCCGA GACGGGGGCG
GAGCTGCCGC AGGGTGAGGT CGGCGTCGTG CAGATCGCCG GGCCCAACGT CTTCCAGGGC
TATTGGCGGA TGCCGGACAA GACCGCGGCC GAGTTCCGCG ACGGCTGGTT CGTCTCGGGC
GACCTGGGCC TGGTCGACGC GCGCGGCTAT GTCACGCTGG TCGGGCGCGC CAAGGACCTG
ATCATCTCGG GCGGATACAA CGTCTATCCA GCCGAGGTCG AGACCGCGCT CGACGAGCTG
CCGCAGGTCC ATGAATCGGC GGTGATCGCC GTCCCGCACC GCGACCTCGG CGAGGCGCCG
GTCGCGGTGA TCGTGCCGCG CGACAAGGGC TATGCCGACG CCGATGCGAT CCGCGCCGGT
CTCGCCGACA CGCTCGCCCG CTACAAGCAG CCGCGCGCCA TCCTGTTCGT CGACGCCCTG
CCCAAGAACG CGATGGGCAA GGTGCAGAAG GCGCTGCTGC GCGAGGAGCA CAAGGACCTG
CTGGCGGCGC GGTAG
|
|---|
| Protein sequence | MSNLYSRLAA GFPDPATPFA HLPDGSVVTY GDVDKRSAAF AHLLRGAGVG VGDRVAVQAE
KSIDMLMLYL GALRAGAVFL PLNTAYTAGE LDYFMRDAEP ALFVCDPAAL PAVAPLAEAA
GVPRVETLGA DGGGSLAALL AGRPESFDDV ARDDKDLAAI LYTSGTTGRS KGAMLSHDNL
GSNAFTLREA WAFGGGDVLL HALPIFHTHG LFVATNTILA AGASMIFLPK FDAAEVLRRL
PRATVMMGVP TFYIRLLDEA GFTRDHVAHM RLFVSGSAPL SADIHREFRE RTGHAILERY
GMTETNMNIS NPYDGDRIAG TVGFPLPGVS IRIADPETGA ELPQGEVGVV QIAGPNVFQG
YWRMPDKTAA EFRDGWFVSG DLGLVDARGY VTLVGRAKDL IISGGYNVYP AEVETALDEL
PQVHESAVIA VPHRDLGEAP VAVIVPRDKG YADADAIRAG LADTLARYKQ PRAILFVDAL
PKNAMGKVQK ALLREEHKDL LAAR
|
|---|
| |