| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2421 |
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| Symbol | |
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| ID | 5197446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2693694 |
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| End bp | 2695493 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581967 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_001262918 |
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| Protein GI | 148555336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.204643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.140627 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGGA GATCGATCAG GATCGAGCGG AAGGGCTTCG GACTGGCGGG CTTCGGCACG
GCGCTCGCCC TCGCCACCGC CTCCATGGCG GGTGCGGCGG GATCGAACGG TTCCCTTGCC
GTGACGCTGG CGCCTGTCGC CGCACCCGCC GCCCCGACCA CGGTCGGCAC CGTCGACGTC
ACCCTGCGCT TCGACGGCAT CGCCGCGAAC AAGGGCGAGC CGCTGCTCCG CCTGCCGATG
GTCAGCAGCA ACGTCGACAC GGTCGCGACC GTCATCGCCG GGATCAGCGC GCGCGACGCC
AGGGGGCCGC TCCGCCTCAC CAGCCGCGAC GTCGACCTGC CCGAGACCGG GATGCGCGAC
GCGGTCGGCG GCGGGCCGTC GCGCGAATGG CTGGCCGACC GCGCGACGGA GGGAGCCGTC
ACCGTCCGCT ACAGCGTCCC CGCCGAGGCG AGCCTGCCGC CGCGCGGGCC GGCGCCGCCC
TTCGCCTTCT CGGCCGACGG CGGCGGCGTG TCGGCGGCGG GCCATGTCTT CCTGCTGCTG
CCCCCCGGCG ACCACCGTTA CCGCACCACC TATGGCTGGG ACCTCGCCCG CGCACCCAAA
GGCAGCCGCG GGGTCAGCTC GCTCGGCGAG GGGACCGTCA CCGCCGCCGA GCCGCTCGAC
GGCGCGCAGC TGCGCATGAG CTTCTTCATG GCGGGGCGGA TCGGCACCTA CCCCCCGAAG
CTGCCCTCGG GCGGCTTCTT CGGCGCCTGG CAGGGCGATC CCGGCTTCGA CGCCGCCGCG
CTGCTCGCCT GGACCGGTAC GCTCTACGAT CACTATGCCC GCTTCTTCGG CCAGAAGGAG
TCGCCGCCCT ATGGCGTCTT CCTGCGCTAC AACCCGATCA ACGCGGGCGG CGGCGTCGGC
CTTTACCATG CGTTCGTCAC CACCTTCGGC AAGGGGCGCG GATCGGACGT CGGCAAGATC
CGGCTGACCC TGGCGCACGA GATGTTCCAC ACCTTCCAGC CGTTCATCGC CACCCCGGCG
GGGCTCGCAT CCTCCTGGTT CGGGGAGGGG CTCGCGACCT TCTACCAGGC GCGGCTGCCC
TTGCGCTTCG GCATGATCTC GCCCGAGGCC TATCTCGCCG ACGTCAACTG GACCGCCGCG
CGCTACTATA CCAGCGCGAT GGCGACCGTG CCCAACAGCG AGGTGCCCAG GCGCTTCTGG
GCCGACACCC GCGTGCGGAC GCTGCCCTAT GATCGCGGCA TGCTCTATTT CGCCACGGTC
GACGACGCGA TGCGCAAGGC GTCGGGCGGC CGGCAATCGC TCGACGACCT GATGCTGGCG
ATGCTGGCGC TTGAGAAAGG GGGCGAGAAA GGGGGCAAGA CGACCGGCAA CGCCGACTGG
GAGGCCTTGC TCGCCCGGCA TCTCGGCCCC AGGGCGGTCG AGGATTTTCG CGCCTTCCTC
GGCGGCGCCA TGCCGCTGCC GGCGTCCGAC GCCTTCGGCC CTTGCTTCCA GCGAACGACC
CGCAGGCTGC GCCGCTACGA GCTGGGCTTC GCGACCGACG TGCTGGCGCA GCCGAAGCGG
ATCGTCCGCG GCCTCGTGCC CGGATCGGCC GCCGCGCTCG CCGGCCTGCG CGACGGCGAC
GAGATCGTCG ACCCGGTGCC GCAGGACGGC ATCCAGGGCG AGCAGGCGGA ACTGATCCGC
CTGCGCATCC GGCGCGGGGA CAAGGTCTTT CCGGTCGTCT ACCTGCCGCG CGGCGAGACG
GTCGACGCCT GGCAGTGGGA GCGCGCGCCC GGCAGCGAGG ACCGGAGCTG CGCGCTCTGA
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| Protein sequence | MARRSIRIER KGFGLAGFGT ALALATASMA GAAGSNGSLA VTLAPVAAPA APTTVGTVDV
TLRFDGIAAN KGEPLLRLPM VSSNVDTVAT VIAGISARDA RGPLRLTSRD VDLPETGMRD
AVGGGPSREW LADRATEGAV TVRYSVPAEA SLPPRGPAPP FAFSADGGGV SAAGHVFLLL
PPGDHRYRTT YGWDLARAPK GSRGVSSLGE GTVTAAEPLD GAQLRMSFFM AGRIGTYPPK
LPSGGFFGAW QGDPGFDAAA LLAWTGTLYD HYARFFGQKE SPPYGVFLRY NPINAGGGVG
LYHAFVTTFG KGRGSDVGKI RLTLAHEMFH TFQPFIATPA GLASSWFGEG LATFYQARLP
LRFGMISPEA YLADVNWTAA RYYTSAMATV PNSEVPRRFW ADTRVRTLPY DRGMLYFATV
DDAMRKASGG RQSLDDLMLA MLALEKGGEK GGKTTGNADW EALLARHLGP RAVEDFRAFL
GGAMPLPASD AFGPCFQRTT RRLRRYELGF ATDVLAQPKR IVRGLVPGSA AALAGLRDGD
EIVDPVPQDG IQGEQAELIR LRIRRGDKVF PVVYLPRGET VDAWQWERAP GSEDRSCAL
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