| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2397 |
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| Symbol | |
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| ID | 5196807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2663249 |
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| End bp | 2664994 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581943 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_001262894 |
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| Protein GI | 148555312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.300063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACA GACATCATCA AACTGACATG GAGCACGGGC AACCCGCTTG TCCGACCGCT
GCCTGTGCGG AACGATCGAA TCAACGGATG ACCATGAAGA CGCTTTTCCT CGCCGCCGCC
CTGCTTGCCG CTCCCGCCGC CGCGCAGGCG GCGCCGCCGC CCAAGCCGAA GCTGATCCTC
GCCATCTCGG TCGACCAGTT CTCCAGCGAG GTCTTCAACC GCTACCGCTC CAGCTACCGG
GCGGGCCTCG CCACCCTGTC GCGCGGGATC GCCTATCCGG TCGCCTATCA CAGCCATGCC
TCGACCGAGA CCTGCCCCGG CCATTCGGTG ATCCTGACCG GCCGCTTCCC CGCCGGCACC
GGCATCGTCG CCAATAGCTG GATCGACCGG AAGACGGGCA AGTCGGTCTA TTGCGTCTCG
GTCCCCGGCC AGTCCGACCC CAAGGCGCGC GGGCCGCAGA ACATCCGCGT CACCACGCTG
GGCGACTGGA TCAAGGCCGC CGAGCCCGGC GCGCGCAGCT TCGCCGTGTC GGGCAAGGAC
CGCGCCGCGA TCGCCATGGC GGGCAAGACC GCCGACGCCG TCTACTGGTG GAACGACGGC
GAGGGCTTCG GCACCTCCCC CTTCGCCGGT CCCGCGACCC CGGCAGTCAC CGAGCCGGCC
GCCGCGTTCG ACGCGCCGCT GCTGAGCGGA TGGAAGACGG CGCGGCCGAC GCTGTGGCCG
GCCCTGCCCA AGCGCTGCGC CGCGCTGCGC AAGCCGCACC GCTTCGGCCA GCTCGACGTC
TCGGGCAATG TCCCGCCCGA GGCCGAGATC GAGGCGATGA AAGGCGACGA CTATCTCGAC
GGCCGCGCCT TCCAGGCCGC GCTGCGCGCC TCGCCATTGT TCGATTCGCT GACCGTCGAT
TTCGCGACGC AACTGATCGC GCGCGAGAAG CTGGGCCACG GCCCGGCCAC CGACGTGCTG
GCGGTCAGCC TGTCGGCGAC CGACTATGTC GGCCATCGCT TCGGCAATGG CGGCGCCGAG
ATGTGCGCGC AGCAGGCCGC GCTCGACGCG ACGATCGGCC GGCTGATCAA GGCGGTCGAG
GCCCAGAAGG TCCCGTTCGT CGTCGTCCTC ACCGCCGACC ATGGATCGAC CGACGCCGCC
GAGCGCCAGC ACGAACATGA CGGCAAGGCG AGCCGGCTCG ACGGCCGCGG CTTCGTCAAG
CGGCTCAACG CCGCGGTGAA GACCGAGCTG GGCCTCGGCG CGGGCGACGA CCCGCTGATC
GGCGACGCCG ACCAGCTCTA TGTCCGCGCT GGCGACGATG CCGCGCTGGC GGAACGCATC
CGCCTCGCGG CGCTCGCCTG GATCAAGCAG CAGCCCGAGG TGGTCGCGGC CTTCACCCAG
GCCGATATCC AGGCGGCGAC GGTGCCCGCC GGTACCCCGC CGGAGATGCT GACCCTGCCG
CAGCGGATGC GGCTGAGCTT CGATCCCGAA CGGTCGGGCG ACATCCTGAC GGTGTTCGCG
GAGCGGACCA GCTTCGGCAT GCCGACCAAG CCGGGCGACA GCGTCGCCGG CCACGGCACG
CCCTGGAACC ACGACCGGCA GGTCCCGATC CTGTTCTGGT GGCCGGGCGC CCCCGCCGCG
TCGCGCGACC AGCCCGCGCA GGTCGTCGAC ATCGCCCCGA CCCTGGCGGC GGTGGCGGGG
ATCAAGCCGC CGGTGCCGGT CGACGGCCGC TGCCTCGATC TCGGCGGCAA CTGCCCGGCG
CCGTGA
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| Protein sequence | MADRHHQTDM EHGQPACPTA ACAERSNQRM TMKTLFLAAA LLAAPAAAQA APPPKPKLIL
AISVDQFSSE VFNRYRSSYR AGLATLSRGI AYPVAYHSHA STETCPGHSV ILTGRFPAGT
GIVANSWIDR KTGKSVYCVS VPGQSDPKAR GPQNIRVTTL GDWIKAAEPG ARSFAVSGKD
RAAIAMAGKT ADAVYWWNDG EGFGTSPFAG PATPAVTEPA AAFDAPLLSG WKTARPTLWP
ALPKRCAALR KPHRFGQLDV SGNVPPEAEI EAMKGDDYLD GRAFQAALRA SPLFDSLTVD
FATQLIAREK LGHGPATDVL AVSLSATDYV GHRFGNGGAE MCAQQAALDA TIGRLIKAVE
AQKVPFVVVL TADHGSTDAA ERQHEHDGKA SRLDGRGFVK RLNAAVKTEL GLGAGDDPLI
GDADQLYVRA GDDAALAERI RLAALAWIKQ QPEVVAAFTQ ADIQAATVPA GTPPEMLTLP
QRMRLSFDPE RSGDILTVFA ERTSFGMPTK PGDSVAGHGT PWNHDRQVPI LFWWPGAPAA
SRDQPAQVVD IAPTLAAVAG IKPPVPVDGR CLDLGGNCPA P
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