Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2382 |
Symbol | |
ID | 5198046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 2647717 |
End bp | 2648331 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640581928 |
Product | peptidase M22, glycoprotease |
Protein accession | YP_001262879 |
Protein GI | 148555297 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCG CGCTCGTGAT CGATACCGCC ACCGCCGCCT GTTCGGTGGC GCTGATCGAA GACGGCGCGA TCGTCGCCGA GGCGCATGAC GTCGTCGGCC GGGGCCATGC CGAACGGCTG ATGCCGATGA TCGCCGCGCT GCCCGGCGGC GGCCGCGCCG ACTCCATCCT GGTCGATTGC GGCCCGGGCA GCTTCACCGG CGTCCGCGTC GGCCTGGCCG CCGCCCGCGC GCTCGCGCTC GGCTGGGGCG TCCCGGTCCA CGGCTATTCG TCGATGGCGG CGATCGCCGC GACCGCGGCG GCGGAGGGCG AGGCCGCGAT CGGCGTCGCG CTGATCGGCG GCCATGGCGA GCTGTTCGTC CAGCGCTATG CGACCGCGCC GCTCGCGCCG TTGTCCGAGC TCGCCTCGCT CCCGCCCGCC GAGGCCGCCG CCGCGGTGCC CGACGGCCAT GTCTTCGGAT CGGGCGCCGA CCAGCTCGTC GCCGCGCGCG GCAGCGGCGT CGCGCACGAC CGGCTGCCGC GCGCGGCCGG GGCCATCGCC CTGCCGCCCG CCCTCGCGCA GCTTCCCCCC AGCCCGATCT ACGGCCGGGG CGCCGACGCG AAGCCCGCCG CATGA
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Protein sequence | MSRALVIDTA TAACSVALIE DGAIVAEAHD VVGRGHAERL MPMIAALPGG GRADSILVDC GPGSFTGVRV GLAAARALAL GWGVPVHGYS SMAAIAATAA AEGEAAIGVA LIGGHGELFV QRYATAPLAP LSELASLPPA EAAAAVPDGH VFGSGADQLV AARGSGVAHD RLPRAAGAIA LPPALAQLPP SPIYGRGADA KPAA
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