Gene Swit_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2382 
Symbol 
ID5198046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2647717 
End bp2648331 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content77% 
IMG OID640581928 
Productpeptidase M22, glycoprotease 
Protein accessionYP_001262879 
Protein GI148555297 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCG CGCTCGTGAT CGATACCGCC ACCGCCGCCT GTTCGGTGGC GCTGATCGAA 
GACGGCGCGA TCGTCGCCGA GGCGCATGAC GTCGTCGGCC GGGGCCATGC CGAACGGCTG
ATGCCGATGA TCGCCGCGCT GCCCGGCGGC GGCCGCGCCG ACTCCATCCT GGTCGATTGC
GGCCCGGGCA GCTTCACCGG CGTCCGCGTC GGCCTGGCCG CCGCCCGCGC GCTCGCGCTC
GGCTGGGGCG TCCCGGTCCA CGGCTATTCG TCGATGGCGG CGATCGCCGC GACCGCGGCG
GCGGAGGGCG AGGCCGCGAT CGGCGTCGCG CTGATCGGCG GCCATGGCGA GCTGTTCGTC
CAGCGCTATG CGACCGCGCC GCTCGCGCCG TTGTCCGAGC TCGCCTCGCT CCCGCCCGCC
GAGGCCGCCG CCGCGGTGCC CGACGGCCAT GTCTTCGGAT CGGGCGCCGA CCAGCTCGTC
GCCGCGCGCG GCAGCGGCGT CGCGCACGAC CGGCTGCCGC GCGCGGCCGG GGCCATCGCC
CTGCCGCCCG CCCTCGCGCA GCTTCCCCCC AGCCCGATCT ACGGCCGGGG CGCCGACGCG
AAGCCCGCCG CATGA
 
Protein sequence
MSRALVIDTA TAACSVALIE DGAIVAEAHD VVGRGHAERL MPMIAALPGG GRADSILVDC 
GPGSFTGVRV GLAAARALAL GWGVPVHGYS SMAAIAATAA AEGEAAIGVA LIGGHGELFV
QRYATAPLAP LSELASLPPA EAAAAVPDGH VFGSGADQLV AARGSGVAHD RLPRAAGAIA
LPPALAQLPP SPIYGRGADA KPAA