| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2340 |
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| Symbol | |
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| ID | 5199800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2597292 |
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| End bp | 2600759 |
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| Gene Length | 3468 bp |
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| Protein Length | 1155 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581886 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001262837 |
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| Protein GI | 148555255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.911184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTACC AGTCGTTCGT GCCGCTGCGG ATCTTTTCCG CCTATACGAT GCTCGAAGGC
GCGATCGACC CGAAGGCGAT CGCGAAGCAT GCGAAGAAGC TCGGCTTCCC GGCGGCGGCG
CTGACCGACC GCAACGGCCT CTATGCCGCG ATGGCCTTCT CCGACGGCGC CAAGAAGGAA
GGCGTCCAGC CGGTGATCGG CACGATGCTG GCGATCCGGC GTCCCGGCAT CGACCAGCTC
ATCATCGACT GGCTGGCGCT CTATGCGCAG GACATGACGG GCTACGACAA TCTCTGCGCG
CTGGTCTCGG CCGCGCATCT CGAACGGCCG GTGCATGAGG ACGCGCATGT CCCGCTGTCG
GCGCTCGAAG GGCGGACCGA CGGGCTGATC GCGCTGACCG CGGGCGGCGA GGGCGCGTTG
ACCCGGCTGC TCGCCGCCGA GCAGGCCGGC GCGGCGGCGA GCTATGCCGA CAAGCTGGAG
GCGCTGTTCC CCGGCCGGCT CTATGTCGAG CTGGCCCGTC GCGGCAATGC CGACGAGGAA
GCCGCCGAGG AGGCGCTGAT CGACCTCGCC TATGCGCGCA ACCTGCCGCT GGTCGCGACC
AACCCGGCCT GTTTCGCCGA GCCCGAATTC CACGCCGCGC ACGATGCGAT GCTGTGCATC
GCCAGCTCCT CCTACATCGA CACAGCCGAA CGGCCGCGCA GCTCGCCCGA CCTGTGGATG
AAGCCCGCCG CCGAGATGGC GAAGCTGTTC GAGGACATCC CCGAGGCGCT GGCGAACACG
CTGGTGGTGG CGCAGCGCTG CGCCGTCGCC GCGCCCTATC GCAAGCCGAT CCTGCCCAGC
CTCGCCGGCG ACCGCGAGGG CGAGGCCGAG GCGCTGCGCC GCGACGCGCG CGAGGGGCTG
GAGATGCGGC TGGAGAAGCT GGGCGTCACC GATGCCGAGC AGCGCCAGGC CTATTTCGAC
CGGCTCGCCT TCGAGACCGA GATCATCATC AAGATGGGGT TTCCCGGCTA TTTCCTGATC
GTCGCCGACT TCATCAAATG GGCGAAGGAT CACGATATCC CGGTGGGGCC GGGCCGTGGT
TCGGGCGCGG GCTCGGTGGT CGCCTGGGCG CTGACCATCA CCGATCTCGA TCCGCTGCGG
CTGGGCCTGC TGTTCGAACG CTTCCTCAAC CCGGAACGCG TGTCGATGCC CGACTTCGAC
ATCGACTTCT GCGAAACCCG GCGTGGCGAG GTGATCCGCT ACGTCCAGGA GAAATATGGC
CGCGACCAGG TCGCGCAGAT CATCACCTTC GGTAAGCTGA AGGCGCGCGC GGTGCTCAAG
GACACCGGCC GCGTGCTGCA GATGAGCTAC GGCCAGGTCG ACCGGCTCGC CAAGCTCGTC
CCCAACCACC CGACCGACCC CTGGACGCTC GACCGCGCGC TCAACGGCGT GCCCGAGCTG
GCCGCCGAAT ATAAGGGCGA CATCGAGGTC CGCCGCCTGC TCGACCTGGC GATGAAGCTG
GAAGGCCTGC CGCGCCACAG CTCGACCCAC GCGGCCGGCG TGGTGATCGG CGACCGGCGG
CTCGACGCGC TGGTGCCGCT CTACCGCGAT CCGCGCTCGG ACATGCCGGT CACCCAGTTC
GACATGAAGT TCGTCGAGGG CGCCGGCCTG GTGAAGTTCG ACTTCCTCGG CCTCAAGACG
CTGTCGGTGC TGCAGAAGGC GGTGCAGTTC CTCAACCAGC GCGGGATCGC GGTCGATCTC
GATTCGCTGC CCTGGGACGA TCCCGAGGTC TATGCCCTGC TCCAGCGCGG CGACACGGTC
GGCGTGTTCC AGCTCGAATC GGAAGGCATG CGCCGCACGC TGGCGGCCGT CCGGCCGACC
TGCTTCGAGG ACATCATCGC GCTGGTGTCG CTCTACCGGC CGGGCCCGAT GGACAATATC
CCGACCTTCG GCGCCCGCAA GAACGGGCGC GAGGAGATCG AATATCCGCA CCCGCTGCTC
GAAGGCATAT TGAAGGAGAC CTACGGGATC TTCGTCTACC AGGAGCAGGT GATGCAGGCG
GCGCAGATCC TCGCCGGCTA TTCGCTCGGC GACGCCGACC TGCTGCGCCG CGCGATGGGC
AAGAAGATCA AGGCGGAGAT GGACGCCCAG CGCAGCCGCT TCGTCGAGGG CTGCGCCGCG
AACGACATCG CCGCGGCCAA GGCCAACGAG CTGTTCGACT TGATCGACAA ATTCGCGGGC
TACGGCTTCA ACAAGAGCCA CGCGGCCGCC TATGCGCTCG TCGCCTATCA CACCGCCTGG
CTGAAGGCGC ACCATAAGGC CGAATTCTAC GCCGCGTCGA TGTGCTACGA CATGGCGCAG
ACCGACAAGC TCGCCATCTT CATCGACGAC ATGCGCCGCA TGGGCATCCA GTGCCTCGGT
CCCTGCATCA ACCATAGCGA GGCGGAGTTC GCGGTCGAGC AGCAGGACGA GGAGCTGTTC
GTCCGCTATG CGCTCGGCGC GCTCAAGGGC GTCGGCGAGA AAGCGATGGA GCAGCTCGTC
GAGGCGCGCA AGGCGAAGGG GCCGTTCGGG AGCCTCGAGG ATTTCGCCGA CCGGATCGAC
CCGCGCCAGC TCAACCGCCG CCAGCTCGAA AGCCTGGCCG GCGGCGGCGC CTTCGACGAG
ATCGAGACGG AGCGCGCCGG CATCTTCGCC TCGGCCGAGC TGATCCTCGC CCATGCGTCG
AGCGCGGCCG AGCAGCGCGA GAGCGGACAG GGCGGCCTGT TCGGCGACAG CCCCGCCGCG
CTCGCGCCGA TCCGCATCGA TCGCGGGCTG CACTGGACGC TGGCCGACCG GATGGCGGCG
GAGAAGGAGA GCTTCGGCTT CTATTTCTCC TCGCACCCGA CCGACCAGGT CCGCCACCTC
GCCGAGGCGA ACGGCGCGCG CAGCTTCGCC GCCTTGTGCG CGCTGCCGGC GCCGGTCGAC
GGCGGGCGGG TCAATTCGGT GATGTCGGCG CTGATCGAGG ACGCCCGCTG GCGGACCTCG
GCCAAGGGCA AGCGCTACAT GATGGCGACC TGCTCCGATT CGAGCGGGCA GTTCATCGCC
ACCTGCTTCG AGGAGAACGC CTCGGCCGAG CTGGAGGCCG CGGCGCGGTC GGGCGCCTGC
GCGCTGCTGC GGGTCGAGCT CGACTGGCGC GCGGGCGAGG AGACGCCCCG GGTCACGGTG
CGCGGGCTGC AGAGCTATGA GTCGATGCAG CAGATCAAGC TGCGCGTCGA CGTCGAGACC
GCCGATCCGG CGGCGATCCC GGCGCTCGCC GCGCTGATGG CCGACGAGCG CGGCGGCCGC
GGCGAGATGT ACCTCAAGGC GATCCTGCCC GACGGCGGCA GGGCGGACGT GCTGCTCGGC
CGCGACTTCC AGCTCGACGC CGAACTGGTC GCCCGGATCG AGCGCCTGCC GGGCATGACC
GCCCGGATCG GCACGGCCGG CCGGCCGCAA TTGTCGGTGG TGGGGTAA
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| Protein sequence | MPYQSFVPLR IFSAYTMLEG AIDPKAIAKH AKKLGFPAAA LTDRNGLYAA MAFSDGAKKE
GVQPVIGTML AIRRPGIDQL IIDWLALYAQ DMTGYDNLCA LVSAAHLERP VHEDAHVPLS
ALEGRTDGLI ALTAGGEGAL TRLLAAEQAG AAASYADKLE ALFPGRLYVE LARRGNADEE
AAEEALIDLA YARNLPLVAT NPACFAEPEF HAAHDAMLCI ASSSYIDTAE RPRSSPDLWM
KPAAEMAKLF EDIPEALANT LVVAQRCAVA APYRKPILPS LAGDREGEAE ALRRDAREGL
EMRLEKLGVT DAEQRQAYFD RLAFETEIII KMGFPGYFLI VADFIKWAKD HDIPVGPGRG
SGAGSVVAWA LTITDLDPLR LGLLFERFLN PERVSMPDFD IDFCETRRGE VIRYVQEKYG
RDQVAQIITF GKLKARAVLK DTGRVLQMSY GQVDRLAKLV PNHPTDPWTL DRALNGVPEL
AAEYKGDIEV RRLLDLAMKL EGLPRHSSTH AAGVVIGDRR LDALVPLYRD PRSDMPVTQF
DMKFVEGAGL VKFDFLGLKT LSVLQKAVQF LNQRGIAVDL DSLPWDDPEV YALLQRGDTV
GVFQLESEGM RRTLAAVRPT CFEDIIALVS LYRPGPMDNI PTFGARKNGR EEIEYPHPLL
EGILKETYGI FVYQEQVMQA AQILAGYSLG DADLLRRAMG KKIKAEMDAQ RSRFVEGCAA
NDIAAAKANE LFDLIDKFAG YGFNKSHAAA YALVAYHTAW LKAHHKAEFY AASMCYDMAQ
TDKLAIFIDD MRRMGIQCLG PCINHSEAEF AVEQQDEELF VRYALGALKG VGEKAMEQLV
EARKAKGPFG SLEDFADRID PRQLNRRQLE SLAGGGAFDE IETERAGIFA SAELILAHAS
SAAEQRESGQ GGLFGDSPAA LAPIRIDRGL HWTLADRMAA EKESFGFYFS SHPTDQVRHL
AEANGARSFA ALCALPAPVD GGRVNSVMSA LIEDARWRTS AKGKRYMMAT CSDSSGQFIA
TCFEENASAE LEAAARSGAC ALLRVELDWR AGEETPRVTV RGLQSYESMQ QIKLRVDVET
ADPAAIPALA ALMADERGGR GEMYLKAILP DGGRADVLLG RDFQLDAELV ARIERLPGMT
ARIGTAGRPQ LSVVG
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