Gene Swit_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2339 
Symbol 
ID5199799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2596482 
End bp2597135 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID640581885 
Producthypothetical protein 
Protein accessionYP_001262836 
Protein GI148555254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.039929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.763516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCC TCCGCAAAGT CCTCGCCGCC GCCGCGCCGC TCGCGCTGCT GGCGGTTTCC 
GCCTGCACCC AGCCGTTCGA AGCCAAGGTG TCGCGCTTCC AGGCGCTGCC CGTGCCCGAA
GGCCAGACCT TCGCGGTGGA AGCCGCCGAC GCGCGCAACG AGGGCGGGCT GGAGTTCGCC
CAATATGCCG GTCTCGTCAC CCAGCGCCTC GCCGCCTATG GCTATCGCCC GGTCGAGGGC
GGCGCCAAGC CCGAGCTGGT CGTCAAATTC GGCTATGGCG TCGACCAGGG CCAGCCCAAG
ACGGTCTCGC GCCCGGCGCC CGGCCCGGCC TTCGGCCCGT GGGGCGGCTG GGGCGGCCCC
TATGGCCGCC GCTGGGGCTA CGGCTCCGCC TTCTATTATG GCTGGGACCC GATGTGGTAC
GATCCCTGGT ACCAGCAGAT CGACACCTAC ACCGTCTACA CCAGCCATGC CGAAATGGTG
ATCGAGCGCA CCGCCGACGG CAAGCATGTG TTCGAAGGCA AGGCCCGCGC CCGCTCGCTC
GACGACGCGC TGCCCAAGCT GGTGCCCAAT CTGGTCGAGG CGATGTTCAC CAACTTCCCC
GGCCAGTCGG GCGAGGAAGT GCGGATCACG ATCGCGCCGG ACAAGAAGCG GTAA
 
Protein sequence
MPILRKVLAA AAPLALLAVS ACTQPFEAKV SRFQALPVPE GQTFAVEAAD ARNEGGLEFA 
QYAGLVTQRL AAYGYRPVEG GAKPELVVKF GYGVDQGQPK TVSRPAPGPA FGPWGGWGGP
YGRRWGYGSA FYYGWDPMWY DPWYQQIDTY TVYTSHAEMV IERTADGKHV FEGKARARSL
DDALPKLVPN LVEAMFTNFP GQSGEEVRIT IAPDKKR