Gene Swit_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2309 
Symbol 
ID5200056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2569158 
End bp2569703 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID640581855 
Producthypothetical protein 
Protein accessionYP_001262806 
Protein GI148555224 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00812325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCGATCG GCCGGAAATC AGCGTTGGCG ATCCATTGCA TCGCTGCCGC ATATGGGTCC 
CTATCGACCG CGATGATGGA TGCCATCGGC ACTTTCGATT GGGGCGCGGC GCGCGGCCTT
CCTATGGCCT GTCCGAAACG ATGCGAGGAG CGGATGGCGA TGGACGAGGG CGAGCGCGGG
ATAGCGGGGG TGATCGCGGC CGAGCAGCGG CGCGGCGAGG CGCTGGTGGC GCGCGACTTC
GCGACGCTGC GCACGCTCGT CGCGCCCGAC ATCACCCACA CCCATACGCG CGGCGTCACC
GACGATTTCG ACGGCTATTT CCGCTTCGTC GAGCAGGAGC TCGCCTTCCT GGAGGCGTCG
CGCGGCCCGC TCGACGTCCG CATCTCGGGC GACATCGCGG TGATGACCGG GACGATGGAC
AATCTGGTCC TGCCGCGCGG CCGGGAAGAG CCGATCCGCA CTCGCGCCCA GGCGCTCCAG
GTCTGGGCGT GGCGCGACGG CGGCTGGCGG ATGATCGCCT TCCAGTCCAC CAACCTGCCC
GCCTGA
 
Protein sequence
MAIGRKSALA IHCIAAAYGS LSTAMMDAIG TFDWGAARGL PMACPKRCEE RMAMDEGERG 
IAGVIAAEQR RGEALVARDF ATLRTLVAPD ITHTHTRGVT DDFDGYFRFV EQELAFLEAS
RGPLDVRISG DIAVMTGTMD NLVLPRGREE PIRTRAQALQ VWAWRDGGWR MIAFQSTNLP
A