Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_2309 |
Symbol | |
ID | 5200056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2569158 |
End bp | 2569703 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640581855 |
Product | hypothetical protein |
Protein accession | YP_001262806 |
Protein GI | 148555224 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02246] conserved hypothetical protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00812325 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCGATCG GCCGGAAATC AGCGTTGGCG ATCCATTGCA TCGCTGCCGC ATATGGGTCC CTATCGACCG CGATGATGGA TGCCATCGGC ACTTTCGATT GGGGCGCGGC GCGCGGCCTT CCTATGGCCT GTCCGAAACG ATGCGAGGAG CGGATGGCGA TGGACGAGGG CGAGCGCGGG ATAGCGGGGG TGATCGCGGC CGAGCAGCGG CGCGGCGAGG CGCTGGTGGC GCGCGACTTC GCGACGCTGC GCACGCTCGT CGCGCCCGAC ATCACCCACA CCCATACGCG CGGCGTCACC GACGATTTCG ACGGCTATTT CCGCTTCGTC GAGCAGGAGC TCGCCTTCCT GGAGGCGTCG CGCGGCCCGC TCGACGTCCG CATCTCGGGC GACATCGCGG TGATGACCGG GACGATGGAC AATCTGGTCC TGCCGCGCGG CCGGGAAGAG CCGATCCGCA CTCGCGCCCA GGCGCTCCAG GTCTGGGCGT GGCGCGACGG CGGCTGGCGG ATGATCGCCT TCCAGTCCAC CAACCTGCCC GCCTGA
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Protein sequence | MAIGRKSALA IHCIAAAYGS LSTAMMDAIG TFDWGAARGL PMACPKRCEE RMAMDEGERG IAGVIAAEQR RGEALVARDF ATLRTLVAPD ITHTHTRGVT DDFDGYFRFV EQELAFLEAS RGPLDVRISG DIAVMTGTMD NLVLPRGREE PIRTRAQALQ VWAWRDGGWR MIAFQSTNLP A
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