| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2272 |
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| Symbol | |
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| ID | 5199178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2528556 |
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| End bp | 2529317 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581818 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262769 |
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| Protein GI | 148555187 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.851754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.710684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTCG GTTTGCAGGG CAAGAAGGCG ATCGTCGTCG GGGCCGCGCG CGGCATCGGC
ATGGCGGTGG CGGAGACGCT TGCGCGCGAA GGGTGCGACC TGGCGATCGC CGCCCGGTCC
GAGGACGGCG TCAAGGACGC GGTGGCGAGC CTCAAGCGCT ACGGCACCAA TGTCGTCGGC
AAGGCCGTCA ACGTGAAGAA GGCGGACGAC TACAAGGCGT GGCTGGCCTG GGCGATCGAG
GCCCTCGACG GCTGCGACAT CCTGATCCCG ATCAGCTCGG CCGGCGGCGG CCTGGGCAGC
GAGAAATATT GGCACAACGC GTTCGAGGTC GACGTGATGG GCCCGGTGCG CGCGGTCGAA
GCCGTGCTGC CGACCATGGC CGAGCGGCAG TCGGGCTCGA TCGTCCTGAT CGCCACCACC
TCGGCCGCCG AGGCGATGGG CGGGCCGCAG CCCTACAACG CGATGAAGGC GTCGCTCGTC
ACCTGGGGCA AGCAGCTCGC GCTGGCCCAC GGCAAGGACG GCATCCGCGT CAACGTCGTC
TCCCCCGGCC CGGTCGAGTT CGAAGGCGGC AACTGGGACA TGATCAAGGG CACGATGGAG
AAATTCTACC AGTCGCAGCT CCGCCAGCAG CCGGCCGGCC GGCTCGGCAC GCCCGAGGAG
ATCGCCCGTT GCATCGTCTT CCTCGCCAGC CCGGCGGCGA GCTGGTGCAA CGGATCGCAC
CTCGTCGTCG ACGGCGCCTT CACCAACCGG ACGCACTTCT GA
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| Protein sequence | MDLGLQGKKA IVVGAARGIG MAVAETLARE GCDLAIAARS EDGVKDAVAS LKRYGTNVVG
KAVNVKKADD YKAWLAWAIE ALDGCDILIP ISSAGGGLGS EKYWHNAFEV DVMGPVRAVE
AVLPTMAERQ SGSIVLIATT SAAEAMGGPQ PYNAMKASLV TWGKQLALAH GKDGIRVNVV
SPGPVEFEGG NWDMIKGTME KFYQSQLRQQ PAGRLGTPEE IARCIVFLAS PAASWCNGSH
LVVDGAFTNR THF
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