| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2260 |
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| Symbol | |
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| ID | 5199844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2514593 |
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| End bp | 2515939 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581806 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001262757 |
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| Protein GI | 148555175 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.665349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTACG ACCGGCGCGG CTGGGCGGTC CACAAGGACT CGACCCATCC GTTCGACGCG
CCCGCCGCCC ATGTCGACAA TGGCGCCGCC CGCCCCGATC CCGCCCGCTA CACCTCGCGG
GCCTTCGCGC GGGAGGAATG GGAGAAGGTC TTCGCCCAGG CCTGGCTGAT GGCGGGCCCG
GTCAGCGACG TGCGCGAGCC GGGCGACTGG ATGCGGTTCG ACATCGGCGT CGAGAGCTTC
ATCATCGTCC GCACGGCCGA TGGCGGGCTG GCCGCGCATT ACAATGTCTG CCCGCATCGC
GGCAGCCGGC TGGTCCAGGA CGACGTCGGA TCGCAGGACG ATTTCACCTG CCCCTTCCAT
AGCTGGCGCT TCGGCCTCGA CGGCCGCAAC CTCGCCGTCA CCGATCCGGA GACCTTCCGG
GCCGAGGTGC TGTGCCACGG CACCGACCTC GGCTCGGTCA GGGTCGAGGC GGCGGCGGGG
ATCGTCTTCC TGTCGATGGC GGAGAATCCG CCGCCGCTCC GCGACTATCT CGGCCCGATC
CTGCCGATGC TCGAAAATTA CCGGATCGAC GAGATGCACG TCGTCCAGCA CCGCCGGTCG
GACTGGGCGG CCAACTGGAA GGGCGGCGTC GACGCCTTCT ACGAAAGCTA CCATCTCCAC
GCGATCCATC CCCAGACGAT GGGGATGCTC GACGACCGCA CCCATATCGA TCTCTATCCG
GGCGGGATGA GCCGGCAGTT CGTCCCCTTC GGCCAGCCCA ATTCGCATTT CCCCGAGCAG
GAGGCGATCA ACCCCGGCAT CGCCGCGATG CTCCAGGACG CGGGCCTCGA CCCCGCGACC
TTCCAGGGCA CCGCGCGGGA GAGCCGCTCG GCGATCGCGA TGGCCAAGCG CGACCGCTCG
GCGCGGCTCG GGCTCGGCTA TGAACGGTTC AGCGACGCGC AACTCACCGA CAGCGTGATC
TTCGGCATCT TCCCCAACGC GCAGATCGGC TGCCATCCCG AGGCGGTGTT CCTCCACCGC
TTCAAGCCGG ACGCCGACGA TCCCGAGCGC TTCACCTATG AGACGACGAT CCTCTACCGC
CATGTCGACG TGCCGGGCTA TGGCGCGCCG CTGTGGATGG GGCTGGGCGA CGATGTCGAC
CTGACCGGGG AGACCCGGCC CGACGTCGTC CACACCGGGC TTGGCGAGCC GCCGGGCATG
GGCGAGGTGC TCGACCAGGA TTCGGACCTG CTGCCGATCG TCCAGGCCGG CGCCCGCTCG
CGCGGTTTCC GCGGCCCGCT CTGGGGCGAG CAGGAGGCGC GGCTGCGCCA CTTCCACGTC
GAGCTCGATC GCTGGATGGG GCGGTAG
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| Protein sequence | MNYDRRGWAV HKDSTHPFDA PAAHVDNGAA RPDPARYTSR AFAREEWEKV FAQAWLMAGP
VSDVREPGDW MRFDIGVESF IIVRTADGGL AAHYNVCPHR GSRLVQDDVG SQDDFTCPFH
SWRFGLDGRN LAVTDPETFR AEVLCHGTDL GSVRVEAAAG IVFLSMAENP PPLRDYLGPI
LPMLENYRID EMHVVQHRRS DWAANWKGGV DAFYESYHLH AIHPQTMGML DDRTHIDLYP
GGMSRQFVPF GQPNSHFPEQ EAINPGIAAM LQDAGLDPAT FQGTARESRS AIAMAKRDRS
ARLGLGYERF SDAQLTDSVI FGIFPNAQIG CHPEAVFLHR FKPDADDPER FTYETTILYR
HVDVPGYGAP LWMGLGDDVD LTGETRPDVV HTGLGEPPGM GEVLDQDSDL LPIVQAGARS
RGFRGPLWGE QEARLRHFHV ELDRWMGR
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