| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2110 |
|---|
| Symbol | |
|---|
| ID | 5197709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2372182 |
|---|
| End bp | 2372967 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581655 |
|---|
| Product | transcriptional regulator IclR-like protein |
|---|
| Protein accession | YP_001262607 |
|---|
| Protein GI | 148555025 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.966848 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGA TCGGAACCTC GGCCCCGCAG ACGCTGACCA GATCGCTGCT GCTGCTCGAG
CGCATCATCG ACGACGATCG CGGCCTGTCG CTGTCGGTGC TCGCCGGGGA ACTCGGCATT
TCCTCATCGA GCGCGCACCG GCTCGCGGTC GGCTTCGAGA AGAGCGGCTT CCTGCTGCGC
GTCGGGCGCG GCCATTATGT CGCGGGGCCG GTGCTGCTGC GGCTGGCGGG CGCGCGGCGC
GACTGGGGCA GCTTCGCCGC GCGGGTCAGC CGGCCGATCC TGGGCCGGCT GTCGCGGCAG
ACCGGCAAGA CCGTCCACCT CGGCGTGTTC GAGGAGAATA TGGTCACCTA TCTGCTCAAG
ATCGGCGACC GCAAGGGCGA GACGATCTCG CGCCAGGGGA TGCAGCTCGA AGCCTATTGC
TCGGGAATCG GCAAGGTGCT GCTCTCGCAC CTGCCCGCCG GCGAGCGCGA CGCCTATCTC
GCCACCGGCC CGTTCGTCGG GCTGACCCCG ACCACGATCA CCTCGGCCGC GGCGCTGCGG
ACCGAGCTCG ATGCGGTGCG TGGCCAGGGC TATGCGATCG ACAATGAGGA GATGGTGCCC
GGCCTGATCT GCATCGCCGC GCCGGTCGCG CGCGCGGGCG ACGTGGTCGC GGCGGTGTCG
ATGGTCGTCT CGCACGACGG GCCGCCCTGC GCGCCCGCCG ACCTGCTGCC GCCGCTCCGC
CGTGCGATCG CCGAGATCGA GGCGCGGCTC TTCCCCTATA CCGACGAGGG CGTCAGCGCG
GGGTGA
|
|---|
| Protein sequence | MTRIGTSAPQ TLTRSLLLLE RIIDDDRGLS LSVLAGELGI SSSSAHRLAV GFEKSGFLLR
VGRGHYVAGP VLLRLAGARR DWGSFAARVS RPILGRLSRQ TGKTVHLGVF EENMVTYLLK
IGDRKGETIS RQGMQLEAYC SGIGKVLLSH LPAGERDAYL ATGPFVGLTP TTITSAAALR
TELDAVRGQG YAIDNEEMVP GLICIAAPVA RAGDVVAAVS MVVSHDGPPC APADLLPPLR
RAIAEIEARL FPYTDEGVSA G
|
|---|
| |