| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2096 |
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| Symbol | |
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| ID | 5198478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2357625 |
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| End bp | 2358398 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581641 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262593 |
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| Protein GI | 148555011 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.479548 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATC GTCTTTTCCC TGATGGCGCC GTGCTGCTGT TCGGCGGCAG CGGCGGGCTC
GGCGGCGCGA TCGCCCTCGA ATTCGCCCGC GCCGGCAGCG CGGTGGCGCT CGGCTATCGC
GGCAACCGCG AGAAGGCCGA GGCGATGGCG GCCGAGATCG CGGCCGTGGG GGTCGAAGCC
AGCACCGTCC AGGCCGACCT CACCGACCGC GCCAGCGTCG AGGCCGCGAT CGCCGCGACG
ATCGAGCGGC ACGGCCGGGT CCACAGCATC GTCTTCGCCG CCGGCCCGCT GGTGCCGCAG
GTCTATATGT CGCAGGTGAC GCCCGAGCAG TGGAGGGCCG CCTTCGCGAT CGAGGCCGAC
GGCTTCTTCA ACGTCGTGCA GGCGGCGCTG CCCCATTTCC GCGCGGCGGG CGGCGGCTCC
TTCGTCCATC TCGGATCGGC CGGCGACCGG CTGTGGCCCG GCAAGGACGG CCTGTCGGTG
GTGCCCAAGG CCGCCAACGA GGCGCTGATA CGCGGCATCG CGCGCGAGGA GGGCCGCTTC
GGCATCCGCG CCAATTCGGT GCTGGTCGGG GTGATCGCCG GCGGCATGTT CGACAAGCTC
GACGCGATCG GCCATTTCGA CGAGGCGTGG AAGGACGCGA CCCGGAAGTC GCTCTCGATC
AAGCGTTACG GCAAGCCCGC CGAGATCGGC CATGCCGCGG TGTTCCTCGC GTCGGAGAAG
GCCGCCTATA TCACCGGCGA GCAGATTTCG GTGTCGGGCG GCTTCGGGGT CTGA
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| Protein sequence | MTDRLFPDGA VLLFGGSGGL GGAIALEFAR AGSAVALGYR GNREKAEAMA AEIAAVGVEA
STVQADLTDR ASVEAAIAAT IERHGRVHSI VFAAGPLVPQ VYMSQVTPEQ WRAAFAIEAD
GFFNVVQAAL PHFRAAGGGS FVHLGSAGDR LWPGKDGLSV VPKAANEALI RGIAREEGRF
GIRANSVLVG VIAGGMFDKL DAIGHFDEAW KDATRKSLSI KRYGKPAEIG HAAVFLASEK
AAYITGEQIS VSGGFGV
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