| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2078 |
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| Symbol | |
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| ID | 5198337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2336138 |
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| End bp | 2336983 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640581623 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262575 |
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| Protein GI | 148554993 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC TGGGCGGACA GCTCCATGTC GTCGCCGGCG CGGGCGGCGG CGGGATCGGC
ACCTCGGCCT GCGTGCTGCT GGCCAGGGCG GGGGCGACGG TGCTCGCGGT CGACAAGACC
GACCTCGGCT GCGCCAGCGC CGCCGAGGCG CTCGAACCGC ATGGGCCGCG GCATCGCGTC
GTCCAGGCCG ACCTCGCCGA CGAGGTGGCG CTCGCCGACG CCCTGGCCGA AGCGGGTCCG
GTGCGCGGAC TGGTCAACGT CGTCGGCGGC ATCACCAGCC AGGATCTGAT CGCGCCGCTG
CTCACCGCCG ACGCGATGGA TATCTTCGAC CGGCTGATGC GGTTCAACAC GGTGCCGACG
CTCGCCGCGT CGCGGACGGT CGCGCGGGCG ATGGTCGGGC ATGGGCAGGG CGGCAGCATC
GTCAACATCG CCTCGGCCGC CGGCATCGCC GGCATGCCCT TCGGCGCGGG CTATGCCGCC
GCCAAGGCCG CGCTGATCAA CCTCACCCGG ACGATGGCGA CCGAATGGGG CGGGGCGGGC
GTCCGGGTCA ACGCGATCGC GCCGGGCAGC ATCGCCACCG CCAAGCTCGG CCGGCAGCGC
TTCGACGGCG GCGCCGACGA GAAGGATCGC GCCGCGAAAG CGGTGGTGCC GCTCGGCCGC
CGCGGCCTGC CCGAGGACAT CGCCGGGGTG GCGCTGTTCC TGCTGTCGGA CCTCGCCGCC
TATGTGTCGG GACAGGTGAT CGCGGTCGAC GGCGGCATGC TCGCCCGGCC GCCCTATAAC
GACGCGGACG GGCTGCCGGT GTTCATGACC GATCCGGCGC TGCGCGAGCG GTTGCTGGGG
GCGTAA
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| Protein sequence | MIDLGGQLHV VAGAGGGGIG TSACVLLARA GATVLAVDKT DLGCASAAEA LEPHGPRHRV
VQADLADEVA LADALAEAGP VRGLVNVVGG ITSQDLIAPL LTADAMDIFD RLMRFNTVPT
LAASRTVARA MVGHGQGGSI VNIASAAGIA GMPFGAGYAA AKAALINLTR TMATEWGGAG
VRVNAIAPGS IATAKLGRQR FDGGADEKDR AAKAVVPLGR RGLPEDIAGV ALFLLSDLAA
YVSGQVIAVD GGMLARPPYN DADGLPVFMT DPALRERLLG A
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