| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_2019 |
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| Symbol | |
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| ID | 5199435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2260372 |
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| End bp | 2261247 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640581563 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262516 |
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| Protein GI | 148554934 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.400564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCG ACCTGCTGGG TTACAGGGGG AAGACCGTCG CCGTCACCGG CGCTGCGACC
GGCATGGGAC GGGAGGCGGC CGAGCTGCTG GTCGCGCTGG GCGCCGAGGT GCATGCGATG
GACATCGCGC CGGTCGACCT GCCGGTCGCG CAGGCGCTGC GCGTCGACCT CTCCGATCCC
GCCTCGATCG ACGCGGCGGT CGCGCAACTG CCCGAGCGGG TCGACTGCCT GTTCGGCTGC
GCCGGCATAT CGGCCATGTA TCTGGGCAGG AGCTTCAGCC CCGTCCATGT CAATCTGGTG
AACTTCGTCG GGCCGCGCCA TCTGGTCGAG AGCCTCGTCC CGCGCATCCC GCAGGGCGGC
GCCATCGCGC TGATCGCGTC GATGAGCGGC AGCGCCTGGC GCGACAAGCT CGCCAAGATC
GACGAGCTGC TCGCGACGCC CGACTTCGCC TCGGCGAAGC GGTGGCTGGA GGATCATGCC
GACGATCCCG AGGTGCTGGG CGGCGATCCG CGCCTCAACA TGAACTACCG CTTCTCGAAG
GAGGCGCTGG TCACCTACAT GAAGCGGCGG ACCTGGGCGC TGGCGGAAAG GCATATCCGC
ATCAACACGC TGAGCCCCGG CCTGACCGTC ACGCCGATGA TGTCGTCCTT CGACGCCATC
TCGCAGACCG GCGATCCCGA TCTCAAGGTG ATCTGGCCGG CGGTGGGCCG CCCCTCCGAC
CCGAGGGAGC AGGCCGAAGC GCTGCTGTTC CTCAACAGCG ACATGGCCCG CTATGTGAGC
GGCGTCGACC TGCTGTCGGA CTATGGCTAC CGCGTGCGCG AGCAGCTCGG CCTCCCGACC
GCGATCGAGG AGATCAAGCA GTTCCAGGAC GCCTGA
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| Protein sequence | MTLDLLGYRG KTVAVTGAAT GMGREAAELL VALGAEVHAM DIAPVDLPVA QALRVDLSDP
ASIDAAVAQL PERVDCLFGC AGISAMYLGR SFSPVHVNLV NFVGPRHLVE SLVPRIPQGG
AIALIASMSG SAWRDKLAKI DELLATPDFA SAKRWLEDHA DDPEVLGGDP RLNMNYRFSK
EALVTYMKRR TWALAERHIR INTLSPGLTV TPMMSSFDAI SQTGDPDLKV IWPAVGRPSD
PREQAEALLF LNSDMARYVS GVDLLSDYGY RVREQLGLPT AIEEIKQFQD A
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