Gene Swit_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_2009 
Symbol 
ID5200155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2248328 
End bp2248705 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID640581553 
Productethyl tert-butyl ether degradation EthD 
Protein accessionYP_001262506 
Protein GI148554924 
COG category 
COG ID 
TIGRFAM ID[TIGR02118] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGC TGGTTTTCAC GCTGAAGCGC AAGGCCGGCA TGACCCCCGC CGCGTTCCGC 
GCGCATTATG AGGATAGCCA CGTCCCCCTC GCGCTGCGCC ATTTCGGCCA CCTGCTGAAG
GAATATCGCC GCAACTATCC GCAATCCGCA GTGCTGAACC CCTCCGGCCA GGACGACAAT
CCGCCCGCCA TCGACCCGCC CTATGACGCG GTCGCCGAAA TGTGGCTGGA GGATGAGGCG
GCGCTGGCCG CGCTGGGCGG CATCCTGGGC GATCCCGAGA TCAGCGCGAG CCTCGCCGCG
GACGAGATGC TGTTCCTCGA GCGGGACCAG ACGCTGATGC TGGTCTGCGA CGAGGTGAAC
ACGGGCACCG GCGCCTAG
 
Protein sequence
MIKLVFTLKR KAGMTPAAFR AHYEDSHVPL ALRHFGHLLK EYRRNYPQSA VLNPSGQDDN 
PPAIDPPYDA VAEMWLEDEA ALAALGGILG DPEISASLAA DEMLFLERDQ TLMLVCDEVN
TGTGA