Gene Swit_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1994 
Symbol 
ID5199673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2234476 
End bp2235291 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content70% 
IMG OID640581539 
Producthypothetical protein 
Protein accessionYP_001262492 
Protein GI148554910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.58377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAA GAGGGAGTCC GGCTGGGTCG ATGGCCGCAA TACGCTACGA TATGCCGATC 
GCCTTCGGCC CCAGCCTGAT GCCCGATCGG AGCGAGGTGC GGGATGCCGA GGTCGTCGCC
CTGTCCTTCG AGACGACCGT CGACGGCGCG GCCGCGCTGT TGCCGCCGGG GATGGTTCCG
GCGGAGCGCC CGGGCTTCTC GGTGACGCGC ATCACCTATC CCTCGGTCGA ATATCTCGGC
GGCCGGGGAT ATTGCGAGGT CGTCCTGGCC GTCGCCGCCC GTTTCAGGGC GGCCGATGGG
GATATCGTCG CGGGCTATGC GCCCGTCATG TGGGTCGACC GCGTCGGCGC ATTGATCGCG
GGGCGCGAGT TCATGGGCTT CGCCAAGCTT CCCGCCGAGC TGCCCCCGAT CGAAGCGGCC
GGAGATGCCC GTCGCTTCGA AGGCCGGGAG GAAGGCGCGC CGCTGTTCGA GGGGGCGGCG
TCGGGACTGG TCCCGCTGCC CGCCGACAAG CTGGAGCGCG TCAATGCCGG CGCCTCGGAA
GTGGTGACGA TGGGCTGGAA GCATATTCCG AGCGCGGAAG GGCCGCCCGA TGCCGACTAT
CCGCTCGCGA ACGTGACGCG CTGGACCTAC CGCCAGGGCT GGACCGGCGA CAGCGCCATC
GCCTTCCATC GGCCCGACGA TCGGGCGGCG CCCTTTTCCT CGCGGGTCGT GGCCGGGCTG
GCGCGATTGC CGATCGTCAG GCCGCGCTCC GCCTTCGTCG CCGTCGGCGA CGTCATCATT
GACCGTGCGG CCACGCGCCG CCTCGTTGGA GCCTGA
 
Protein sequence
MARRGSPAGS MAAIRYDMPI AFGPSLMPDR SEVRDAEVVA LSFETTVDGA AALLPPGMVP 
AERPGFSVTR ITYPSVEYLG GRGYCEVVLA VAARFRAADG DIVAGYAPVM WVDRVGALIA
GREFMGFAKL PAELPPIEAA GDARRFEGRE EGAPLFEGAA SGLVPLPADK LERVNAGASE
VVTMGWKHIP SAEGPPDADY PLANVTRWTY RQGWTGDSAI AFHRPDDRAA PFSSRVVAGL
ARLPIVRPRS AFVAVGDVII DRAATRRLVG A