| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1967 |
|---|
| Symbol | |
|---|
| ID | 5197573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 2204198 |
|---|
| End bp | 2204992 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640581512 |
|---|
| Product | PhzF family phenazine biosynthesis protein |
|---|
| Protein accession | YP_001262465 |
|---|
| Protein GI | 148554883 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGA TCGGTTTCGA GGTCGTCAAT TGCTTTGCGG CCCAGGATTT CGCCGGCAAC
CCGATCTGCG TGATCCGCGA TCCGGTCGAG GAAGGGTTGA TGGGCCGCAT CGCCCGGCAG
ATGGGGTGCA CGCTGACGGT GTTTCCGACC CGGATCGGGC CAGGACGCTT CACCACGCGC
ATGTTCACCG TCAGCCGCGA GGTCCCCTTC GGCGGCTCGG GGGCGCTCGC CGCCGTCTGG
GCGATGGGGG AAGGGCGCTG GACATTGTCC ACCGCCGGCG GCGACGTCGA AACCGAATAT
GGCGGGGGCA GGGCCTGGAC GACCCAGCCC GTACCGGGGA TCGAGCGCAT CGACGACGAC
GAGGTCGCGG ATGCGATCGG CCTGTCCACC GTCCGGGGCC TGTTCCTCGG CAGCGCGTCG
GGCAACCGCC ATGTCGTCGC GGTCACCGAC GACGATCCCG CCGATTTCCG CCCTCGGGCC
GATCTGCTGG GCAGGATCGC CCGCCGCTAC GGGGGCGCCA CGGTCGGCGC GGTCCGGCGG
ATCGGCGCCG ATGAAATGCA TGGCCGTATC TTCACGCCCG CGCACGGGCT GTTCGAGGAT
CCGGCGGTCG GCGGCGGCGC GCCCACCCTC GCGCGGATCA TGCGCGACCA TTTCGACGGC
GCCGAACAAT GCCTGATCCG CCAGGGCGAG GTGCTGGGGC GGCCGTCGCG GATGGAGGTG
GTCCTGCGGC CCGGCGGCGT GAAGGTGGGC GGCGGGGTGC GCAAGGCGGC CGAGGGCGTG
CTGCTCCTCG ATTGA
|
|---|
| Protein sequence | MARIGFEVVN CFAAQDFAGN PICVIRDPVE EGLMGRIARQ MGCTLTVFPT RIGPGRFTTR
MFTVSREVPF GGSGALAAVW AMGEGRWTLS TAGGDVETEY GGGRAWTTQP VPGIERIDDD
EVADAIGLST VRGLFLGSAS GNRHVVAVTD DDPADFRPRA DLLGRIARRY GGATVGAVRR
IGADEMHGRI FTPAHGLFED PAVGGGAPTL ARIMRDHFDG AEQCLIRQGE VLGRPSRMEV
VLRPGGVKVG GGVRKAAEGV LLLD
|
|---|
| |