Gene Swit_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1943 
Symbol 
ID5200344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2177544 
End bp2178071 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content73% 
IMG OID640581488 
Productamino acid-binding ACT domain-containing protein 
Protein accessionYP_001262441 
Protein GI148554859 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2716] Glycine cleavage system regulatory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT CCGTCATCCT CACCGTCGTC GGCAGCGACC GCCCCGGCCT GACCCGCGCG 
CTGGCCGACG CGGTCTATGC GGCGGGCGGC AACTGGCTCG AAAGCCATCT CGCGCGGCTG
GGCGGGAAAT ATGTCGGATC GGTGCTGGTC GAGCTGCCCG GCGACCGCCT CGCCGAGCTG
GAAGCCGCGG CGCTTGCGAT CGACGCCGAG GGCCTGAGCG TCGCGCTGGT CCCCGCCGCC
GCGCCCGGCG GCGATCGCGG CGGCCAGCCG CTCGGCATCG AGATCGTCGG CCAGGACCGC
CCCGGCATCG TCCGCGAGGT GACGACCGTG CTCGCCGGGC TGGAGGTCAA TATCGAGGAC
TTCACCAGCG AGATCGAGGG CAGCGCCTGG TCGGGCGCCC CGCTGTTCCG CGGCCGGGCC
AGGCTGCTCC TCCCCGCCAC CGTCACGACC GACCAGGTCC GCGCGGCGCT GGAGGAGATA
TCGGGCGAGA TCATGGTCGA TTTCAACCGG CAGGCGGAGG CGGTCTAG
 
Protein sequence
MNQSVILTVV GSDRPGLTRA LADAVYAAGG NWLESHLARL GGKYVGSVLV ELPGDRLAEL 
EAAALAIDAE GLSVALVPAA APGGDRGGQP LGIEIVGQDR PGIVREVTTV LAGLEVNIED
FTSEIEGSAW SGAPLFRGRA RLLLPATVTT DQVRAALEEI SGEIMVDFNR QAEAV