| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1933 |
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| Symbol | |
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| ID | 5200946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2165490 |
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| End bp | 2166527 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640581478 |
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| Product | putative DNA-binding/iron metalloprotein/AP endonuclease |
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| Protein accession | YP_001262431 |
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| Protein GI | 148554849 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGA TCCTCGGTAT CGAATCAAGC TGCGACGAGA CCGCCGCGGC GCTGGTGACC
AGCGACGGTC GCGTGCTCGC GCATCGCCTC GCCGGGCAGG AGGAGGCGCA TCGCCCGTTC
GGCGGCGTCG TCCCCGAGCT GGCGGCGCGC GCGCATGTCG AGATGGCGGT GCCGCTGGTC
GAAGCCGCGC TGGCCGATGC CGGCGTCACC CTGGCCGATG TCGACGCGAT CGCCGCGACG
GCGGGTCCCG GCCTGATCGG CGGCGTGATG GTGGGGCTGA TGACCGGCAA GGCGCTCGCC
CATGCCGCGG GCAAGCCGCT GATCGCGGTC AACCATCTCG AAGGGCATGC GCTGTCGCCG
CGCCTCGCCG ATCGCGAACT CGCCTTTCCC TATCTGCTGC TGCTCGTCTC GGGTGGCCAT
TGCCAGTTGC TGCTGGTCAG GGGCGTGGGC GACTATCGCC GGCTCGCCAC GACGATCGAC
GACGCGGCGG GCGAGGCGTT CGACAAGACC GCCAAGCTGC TCGGCCTCGG CTTTCCCGGC
GGCCCGGCGG TCGAGCGCGC GGCGGCGAAG GGCGATCCCA GGGCGGTGCC GCTGCCGCGT
CCGCTGGTCG GCAGCGGCGA GCCGCATTTC TCCTTCGCCG GGTTGAAGAG CGCGGTGCTG
CGCGCCCGCG ATGCCGGCAT CCACCGGCCC GAGGACATCG CCGCCTCCTT TCAGCAGGCG
GTGGTCGACT GCCTGGTCGA CCGCACGCGC CGCGCGATCG CCGCGATCGA TGACGACGTC
GGCGCGCTGG TGGTGGCGGG CGGCGTCGCC GCCAACCAGG CGATCCGCAC CGCGCTGGCG
GCGCTCGCCG AAAGCAGCGG CCTCGCCTTC GCGGCCCCGC CGCTCTGGCT GTGCACCGAT
AATGGCGCGA TGATCGCTTG GGCCGGGGCC GAGCGGTTCG GAGCCGGACT GATCGACGAT
ATGGAGGTGC CGGCGCGGGC GCGCTGGCCG CTCGATCCCA CCGCGGAAAA GGCGCGCGGC
GCCGGAGTGA AGGCATGA
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| Protein sequence | MALILGIESS CDETAAALVT SDGRVLAHRL AGQEEAHRPF GGVVPELAAR AHVEMAVPLV
EAALADAGVT LADVDAIAAT AGPGLIGGVM VGLMTGKALA HAAGKPLIAV NHLEGHALSP
RLADRELAFP YLLLLVSGGH CQLLLVRGVG DYRRLATTID DAAGEAFDKT AKLLGLGFPG
GPAVERAAAK GDPRAVPLPR PLVGSGEPHF SFAGLKSAVL RARDAGIHRP EDIAASFQQA
VVDCLVDRTR RAIAAIDDDV GALVVAGGVA ANQAIRTALA ALAESSGLAF AAPPLWLCTD
NGAMIAWAGA ERFGAGLIDD MEVPARARWP LDPTAEKARG AGVKA
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