| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1920 |
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| Symbol | |
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| ID | 5197061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2153033 |
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| End bp | 2153866 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581465 |
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| Product | patatin |
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| Protein accession | YP_001262418 |
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| Protein GI | 148554836 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCG CGGTCGCGCT TGGCGGGGGA GCAGCGCTCG GCTGGGCGCA TATCGGCGTG
CTGCGCGCGT TGCAGGACAA CGGCATCCCG ATCCGCGCGG CGGCCGGCAC CTCGATCGGC
GCGCTCGCGG CGGTCGCCTA TGCCGCGGGC AAGCTCGACC CGCTCGAACG CATCGCGCGC
TCGGCCAACT GGCTGCGCGT CCTCTCCTAT CTCGACATCC ATTTCCGGCC GGGCGCGATG
CTGGGCGGGC GCGGCATAGT GCGCGACCTG GAGATGCATT TCGCCCGGTT GCAGTTCCAG
GAGCTGCTGA TCCCCTCGGC GGCGGTCGCC TGCGACCTCG TCGCCGGAAC GCCGGTGATC
ATCGACCGGG GGCCGGTCAA TCCGGCGATC ATGGCGTCGA TCGCGATCCC CGGCCTGTTC
CGGCCGGTGC AGTTCGACGG CAAGTTCCTG GTCGACGGCG GGGTGGTGAT GCCGGTGCCA
GTCGCGGCGG CGCGGCGGAT CGCGCCGAAC TATCCGGTGC TGTCGGTCAA CCTGCAGGGC
GATTATCACG GCCGCCGGGT CGCTTCGGCG ATCCGCGCGC GGCCGACGCG CAACCATCCG
TCGATGGCGG TCGTTCGTGC ATCCACCATG TTGCTGATGT CCGAACTGGC GCGCCACTCG
CTGGCGCTCG ATCCGCCCGA CTATGCGCTG ACCCTGCCGG TCGGCCATGT CGAGATCCAT
GATTTCACGC GCGCCGACGA GCTGATCGCG ATCGGCCGCC GCACGGTGGA GGCGCATATC
GACGATATCC GCGCGCTGGT CGGCCGGCCG CCGCGCCGGG CGGGGCGGCG ATGA
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| Protein sequence | MGIAVALGGG AALGWAHIGV LRALQDNGIP IRAAAGTSIG ALAAVAYAAG KLDPLERIAR
SANWLRVLSY LDIHFRPGAM LGGRGIVRDL EMHFARLQFQ ELLIPSAAVA CDLVAGTPVI
IDRGPVNPAI MASIAIPGLF RPVQFDGKFL VDGGVVMPVP VAAARRIAPN YPVLSVNLQG
DYHGRRVASA IRARPTRNHP SMAVVRASTM LLMSELARHS LALDPPDYAL TLPVGHVEIH
DFTRADELIA IGRRTVEAHI DDIRALVGRP PRRAGRR
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