Gene Swit_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1915 
Symbol 
ID5196283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2149192 
End bp2149608 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content72% 
IMG OID640581460 
Producthypothetical protein 
Protein accessionYP_001262413 
Protein GI148554831 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGCA AGATCGACGA CAGCATCTCG GTGTCCCCGC AGATCAGCGT GGAGGATGTC 
CGGGCCGCGG CGGACCAGGG CTTCACCATG ATCATCAACA ACCGCCCCGA GCAGGAGGAG
CCCGGCCAGC CGGCCGGCGA CGACATCCGC GAGGCGGCGC GCGCGGCGGG GCTCGCCTAT
GTCGCGATCC CGATCGGCCA TGGCGGCTTC TCCGCCAACC AGGTCGACGC GATGCGCGAC
GCCCTCGCCA ATGCCGGCGG CCCGGTGCTC GCCTTCTGCC GCTCGGGCAC CCGCTCGACC
TTCGTCTGGG CGCTGGCGAA GGGTGCCGAC GGCGAGGACC CCGAACTGCT CGCCCGCAAG
GCGGCGGGCG CGGGGTACGA CATCTCGCCG ATCAAGCCGC TGCTAGGGGC TCGGTAG
 
Protein sequence
MFRKIDDSIS VSPQISVEDV RAAADQGFTM IINNRPEQEE PGQPAGDDIR EAARAAGLAY 
VAIPIGHGGF SANQVDAMRD ALANAGGPVL AFCRSGTRST FVWALAKGAD GEDPELLARK
AAGAGYDISP IKPLLGAR