Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1907 |
Symbol | |
ID | 5200980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 2137234 |
End bp | 2137947 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640581452 |
Product | hypothetical protein |
Protein accession | YP_001262405 |
Protein GI | 148554823 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.916544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGGA GCTTCGTCCT GGTCCACGGC GCCTGGCGGG GTGGGTGGTG CTATACACGG ACCGCCGCGC TGCTGCGCGC GGCCGGGCAC CGCGTCTTCA CCCCGACCTT GACCGGGCTC GGCGAGAGAT CGCACCTGGC GACGGGATCG GTCGGTTTCC GCACCCATGT CGACGACGTC GCCAACGTCC TGCGATGGGA AGGGCTCGAT GATGTCGTGC TGTGCGGCCA CTCCTATGGC GGGATGGTCG CGGCGGCCGT CGCCGACGCG ATGCCCGACC GTATCGCCGC GCTGCTGTTC CTCGACGCGA TCCTGCCCGA GGCCGGCAAG TCGCTGCTCG ACATCTGCGC GGCCGAGGAG GTTGCGACCG GCCTGCTGCG ATCCGCGGCG GCCAGCGGCG GCCGGTTGGT GCCGCCGCTC CCCGCCGCGC TGTTCGGCCT CAACGAAGCC GACGTGGCGA TGGTCGAGGC GCTCTGCACG CCGCACCCGC TCCCATGCTT CTGCGAGCCG GTCGAGCTGA CCGGCGCCTG GGAGGGGATC GCGCGCAAGA CCTATGTCCG CGCGACCGGA TGGGCCGGTT ATGCGGCGCT CGGCTTTGAC CCGATGGCGA AGGTCGAGGC CGGGGCCGGC TGGTCGACGA TCGATGTCGA CTGCGGGCAT GAGGTCGCCC TCGACGCGCC CGCCCGGCTC GCGGACATGC TGCTGAACGC ATAG
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Protein sequence | MSRSFVLVHG AWRGGWCYTR TAALLRAAGH RVFTPTLTGL GERSHLATGS VGFRTHVDDV ANVLRWEGLD DVVLCGHSYG GMVAAAVADA MPDRIAALLF LDAILPEAGK SLLDICAAEE VATGLLRSAA ASGGRLVPPL PAALFGLNEA DVAMVEALCT PHPLPCFCEP VELTGAWEGI ARKTYVRATG WAGYAALGFD PMAKVEAGAG WSTIDVDCGH EVALDAPARL ADMLLNA
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