Gene Swit_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1907 
Symbol 
ID5200980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2137234 
End bp2137947 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content71% 
IMG OID640581452 
Producthypothetical protein 
Protein accessionYP_001262405 
Protein GI148554823 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.916544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGA GCTTCGTCCT GGTCCACGGC GCCTGGCGGG GTGGGTGGTG CTATACACGG 
ACCGCCGCGC TGCTGCGCGC GGCCGGGCAC CGCGTCTTCA CCCCGACCTT GACCGGGCTC
GGCGAGAGAT CGCACCTGGC GACGGGATCG GTCGGTTTCC GCACCCATGT CGACGACGTC
GCCAACGTCC TGCGATGGGA AGGGCTCGAT GATGTCGTGC TGTGCGGCCA CTCCTATGGC
GGGATGGTCG CGGCGGCCGT CGCCGACGCG ATGCCCGACC GTATCGCCGC GCTGCTGTTC
CTCGACGCGA TCCTGCCCGA GGCCGGCAAG TCGCTGCTCG ACATCTGCGC GGCCGAGGAG
GTTGCGACCG GCCTGCTGCG ATCCGCGGCG GCCAGCGGCG GCCGGTTGGT GCCGCCGCTC
CCCGCCGCGC TGTTCGGCCT CAACGAAGCC GACGTGGCGA TGGTCGAGGC GCTCTGCACG
CCGCACCCGC TCCCATGCTT CTGCGAGCCG GTCGAGCTGA CCGGCGCCTG GGAGGGGATC
GCGCGCAAGA CCTATGTCCG CGCGACCGGA TGGGCCGGTT ATGCGGCGCT CGGCTTTGAC
CCGATGGCGA AGGTCGAGGC CGGGGCCGGC TGGTCGACGA TCGATGTCGA CTGCGGGCAT
GAGGTCGCCC TCGACGCGCC CGCCCGGCTC GCGGACATGC TGCTGAACGC ATAG
 
Protein sequence
MSRSFVLVHG AWRGGWCYTR TAALLRAAGH RVFTPTLTGL GERSHLATGS VGFRTHVDDV 
ANVLRWEGLD DVVLCGHSYG GMVAAAVADA MPDRIAALLF LDAILPEAGK SLLDICAAEE
VATGLLRSAA ASGGRLVPPL PAALFGLNEA DVAMVEALCT PHPLPCFCEP VELTGAWEGI
ARKTYVRATG WAGYAALGFD PMAKVEAGAG WSTIDVDCGH EVALDAPARL ADMLLNA