| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1880 |
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| Symbol | |
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| ID | 5197950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 2105815 |
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| End bp | 2107941 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581425 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_001262378 |
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| Protein GI | 148554796 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0685548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGC GGTCCTTCGC CGCCGAGGTC GAGCTGCTCA AGCTCGGCGA GGGCGAGACC
TTCACCGGCG AGGGCATCCT CGCGGTCACC AAGGCGCTGC TCCAGTCGGG CGTCGCCTAT
GTCGGCGGCT ATCAGGGATC GCCGATCAGC CACCTGATGG ACGTGTTCGC CGACGCCAAC
GACCTGCTCG CCAGCCTCGG CGTCCATTTC GAGGCGAGCG CGAGCGAGGC GACGGCGGCG
GCGATGCTCG CGGCGTCGGT CAACTACCCG CTGCGCGGCG CGGTCGCGTG GAAATCGGTG
GTCGGCACCA ACGTCGCCTC GGACGCGCTC TCCAACGTCG CCTCGGGCGG CGTCACCGGC
GGCGCGCTGG TGATCGTCGG CGAGGATTAT GGCGAAGGCT CCTCGATCAT GCAGGAGCGG
ACCCATGCCT TCGCGATGAA GTCGCAGATG TGGCTGATCG ACCCGCGCCC CAACCTGCCG
AGCATCGTCG ACGCGGTCGA GCAGGGCTTC CGGCTGTCGG AAGCGTCGAA CACGCCGGTG
ATGCTCGAGC TGCGCGTCCG CTCCTGCCAC ATGACCGGCA GCTTCGTCGC CAAGGACAAT
CTCCGCCCGG CGATGACCGT CGACGAGGCG GCGGCCGCGC CGGTGCGCGA CACCAGCCGC
ATCGTGCTGC CGCCCGCCAA TTTCCTCCAC GAGGTCGAGA AGGTCGAGAA GCGCTGGCCC
GCCGGCATCG CCTTCGTCCG GGAGAACCGG CTCAACGAAT GGTTCGGCCC CGACGAGGGC
GAGGTCGGGC TGATCGTCCA GGGCGGCCTG TTCAACAGCC TCAACCGCGC GATGGAGCTG
CTCGGCCTGT CCGACGCCTT CGGCGCGGCG CGGCTTCCGG TCTATTGCCT CAACGTCACC
TATCCGCTGA TCCCCGACGA GGTCGCCGCC TTCTGCCGCG GCAAGCGCGC CGTGCTGGTG
CTGGAGGAGG GGCAGCCCGA GTTCATCGAG CATGAGCTGA ACACGCTCGT CCGCCGCGCC
GACCTGCAGA CGCGGATCGT CGGCAAGGAG GTGCTGCCCC GCGCCGGCGA CTATACCGCG
CATGTCATGG CGCAGGGCCT GCGCACATTC CTGGCCGAAT GGCAGCCCGC GCTGGACCTG
CCCGACCTGT CGATCGCGCC GCTGCCGGCG CCGGTCGCGG CGCAGATCCC GCAGCGCCCG
GCCGGCTTTT GCACCGGCTG TCCCGAGCGC CCGGTGTTCA CCTCGATGAA GCTGCTCGAA
CGCGAACTGG GGCCGACCCA TGTCTCGGCC GACATCGGCT GCCACCTCTT CTCGATCCTG
CCGCCGTTCA ACATCGGCAA CACGACGATG GGCTATGGCC TGGGCACCGC CGGCGCCTCC
GCCTTCAAGC CGAAGGACAA GCGCGCGATC GCGGTGATGG GCGACGGCGG CTTCTGGCAC
AACGGCCTGA CCTCGGGCAT CGGCAACGCC GTCTTCAACA AGGACGACAC CGTCACCGTC
ATCGTCGACA ACGGCTATTC GGCCGCGACC GGGGGACAGG ACATATTGTC GTCGCGCGCC
GACAACCGGG CGCGCACCAC CCGCCATCCG ATCGAGCGGG CGGTGCGCGG GATCGGCGCG
GGCTGGGTCC GCACCGTCGA CCGCACCTAT GACCTCAAGC GGATGATGGC GGCGCTGCGC
GAGGCGATGA CCAGCCCCGA GCGCGGGCCC AAGATCGTCG TCGCCCAGTC CGAATGCATG
CTCAACCGGC AACGGCGCGA GAAGCCGCGC GTCCGCAAGG CGATGAGCGA GGGCAAGCGC
GTGGTGCGCG AGCGCTTCGG CGTCGATCCC GACACCTGCA CCGGCGACCA TAGCTGCATC
CGCCTGTCGG GCTGTCCGTC GCTGTCGATC AAGCCCAACC CCGATCCGCT GCGCCGCGAT
CCGGTCGCGC ATGTCGACAA TAGCTGCGTC GGCTGCGGCC TGTGCGGCGA GGTGAGCCAT
GCCGCCGTGC TCTGCCCGAG CTTCTACCGC GCCAGCATCG TCGCCAATCC GGGGCGGTGG
GAAGGCCGGT GGAAGGCGTT GCGGTCGCGG CTGATCGGCG CCCTGCAGAA GCGCGATGCG
CGGCTCCGCG CGGCGAGGGC GTTCTGA
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| Protein sequence | MAERSFAAEV ELLKLGEGET FTGEGILAVT KALLQSGVAY VGGYQGSPIS HLMDVFADAN
DLLASLGVHF EASASEATAA AMLAASVNYP LRGAVAWKSV VGTNVASDAL SNVASGGVTG
GALVIVGEDY GEGSSIMQER THAFAMKSQM WLIDPRPNLP SIVDAVEQGF RLSEASNTPV
MLELRVRSCH MTGSFVAKDN LRPAMTVDEA AAAPVRDTSR IVLPPANFLH EVEKVEKRWP
AGIAFVRENR LNEWFGPDEG EVGLIVQGGL FNSLNRAMEL LGLSDAFGAA RLPVYCLNVT
YPLIPDEVAA FCRGKRAVLV LEEGQPEFIE HELNTLVRRA DLQTRIVGKE VLPRAGDYTA
HVMAQGLRTF LAEWQPALDL PDLSIAPLPA PVAAQIPQRP AGFCTGCPER PVFTSMKLLE
RELGPTHVSA DIGCHLFSIL PPFNIGNTTM GYGLGTAGAS AFKPKDKRAI AVMGDGGFWH
NGLTSGIGNA VFNKDDTVTV IVDNGYSAAT GGQDILSSRA DNRARTTRHP IERAVRGIGA
GWVRTVDRTY DLKRMMAALR EAMTSPERGP KIVVAQSECM LNRQRREKPR VRKAMSEGKR
VVRERFGVDP DTCTGDHSCI RLSGCPSLSI KPNPDPLRRD PVAHVDNSCV GCGLCGEVSH
AAVLCPSFYR ASIVANPGRW EGRWKALRSR LIGALQKRDA RLRAARAF
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