| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1837 |
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| Symbol | |
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| ID | 5197018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 2057793 |
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| End bp | 2058590 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640581382 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262335 |
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| Protein GI | 148554753 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.187404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGCGG CCGAGGCGCA TGGCGTGCCC TCCCCGGACT TCCCGGATGC GGACGGCGTC
GCGCTGGTCA TCGGCGGCAG CGGCGGGATC GGACGGGCGA TCTGCGAGAA GCTTGCGGCG
GCGGGAACCG ACGTCGCGCT GACCTACCGC AGCAACCCGG CGACCGCCGA CGAAGTGGTC
TCCGCCGTCG AGCGCCACGG GCGAAACGCC GTCGCCCATG CGCTGGACAT GGCCGACCCG
GCGGACGTCG CCCGCGCCTG CGCCGCCATC GTCGCGCGGC ACGGGCGCAT CCACACCGTG
GTCAACGCCA CCGGATCGCA TATCGCGATG AAGTATATCG GCGACATCGG CCCCGACGAG
TTCGGCCGGG TGATGCGCGC CGACGTCGAC GGCTGGTTCG CCGCCGTCCA CGCGCTGCTG
CCGCACATGC GCGCGAAGGG CGGCAGCTTC GTCACGCTGA GCACGACCGG CCTGTTCCGC
TGGCCGGCGA AGGACGCGCT GTCGGTCATC CCCAAGGCGG CGAACGACGC GCTGATGACC
GGCATCGCGC GGGAGGAGGG TCGCAACGGC ATCCGCGCCA ACACCGTCGC ACTGGGGCTG
ATCGACGCGG GGCTGTTCCG CAAGCTGATC GGCGTCGCCT ATGACGATGC CTATATCGAG
GCGGCCAGGC GCAATTCGGC GCTGAAGCGG CTCGGCACCG CCGACGAGGT GGCGGAGGCG
GTGCTGTTCT TCGCCTCGCA CCGAGCCCGC TTCGTGACCG GCCAGACGCT GACGCTCGAT
GGCGGCTACA GCCTCTAG
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| Protein sequence | MTAAEAHGVP SPDFPDADGV ALVIGGSGGI GRAICEKLAA AGTDVALTYR SNPATADEVV
SAVERHGRNA VAHALDMADP ADVARACAAI VARHGRIHTV VNATGSHIAM KYIGDIGPDE
FGRVMRADVD GWFAAVHALL PHMRAKGGSF VTLSTTGLFR WPAKDALSVI PKAANDALMT
GIAREEGRNG IRANTVALGL IDAGLFRKLI GVAYDDAYIE AARRNSALKR LGTADEVAEA
VLFFASHRAR FVTGQTLTLD GGYSL
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