| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1805 |
|---|
| Symbol | |
|---|
| ID | 5196379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 2018139 |
|---|
| End bp | 2019371 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581351 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001262304 |
|---|
| Protein GI | 148554722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTTT CGCCGGACGG TGGCGTCATG GCGCGCATGA GGATCGGATT TCTGTTCAAT
CACGACCAGG TCCACCAGGT CGCCCACGCC CTGCCCATCG CCCTGGCGAT GCGCCGGCTC
CATCCCACCG CCGAGATCGT CGTCGCCACG ACCAACGACC GGCTGACGGC CGAGGTCCAC
CGCCTGGCGG GCGACGCCGC CGACGGCCTG ACCATCGTCC AGCTCGCGCT GCGCAAGCCG
CTGACGCGCT TTCTGGCCCG GCATCTCGAA TGGGCGCTGC CGGTGCGCAA GATCGGCGTC
TATCGCGACA ATCTCGACCT GTTCGAAGGC CTCGACGCGC TCGTCGTCAC CGAGAAGACC
TCGCTCCTGC TCAAGACCCG CTACGGCCTG AGGGTGCCGA TCATCCACAC GCGGCACGGC
GCGGGCGATC GCGCGATCGG CTTCGACAAG GCAAGCGCCC GGTTCGACCG GGTGCTCGTG
TCGGGCCCCA AGATCCGCCG CCGCCTGGTC GAGGAGGCCC ATGTCGCCCC CGACCGGATC
GAGACCGTCG GCTATGCCAA ATTCGACCTG ATCGGGGAAC GGTCGCCCCG CCTGCCCTTC
CAGGACAACG GCAAGCCGAC GGTGCTCTAC AACCCGCACC TCTCGCCGCA TTTGTCGTCC
TGGTACCGCC ACGGCCGCGC GGTGCTCGAC CATTTCCTGC ACGACGACCA GTTCAACCTG
ATCTTCGCGC CGCACGTCAT GCTGTTCCAC CGCCGTTTCG TCGTCACGAT CGACAAGCTG
CGGATCGACC GGCCCGGCGT CGTCGAGCAG CGTCATCTCG ACGCGCCCAA CATCCATGTC
GACCTGGGCA GCCCGGCCTC GACCGACATG ACCTACACGC TCGCCGCCGA CATCTACCTC
GGCGACGTCA GCAGCCAGGT CTACGAATTC CTCCACCGCC CGCGTCCCTG CGTCTTCCTC
AACAGCCATG ACGTCGACTG GCGCGGCGAT CCCAATTACG CGCATTGGGC GGCGGGACCG
GTGATCCATG ATCCGGCCAA TCTCGGCGCG GCGATCGACT GGGCGATGGT CGCGCGCGAC
CAGTATGAGC CGGTCCAGCA GCAATTGTTC GCCGACAGCT TCGACCTGTC GGACGAGCCC
TCCTCGCTGC GCGCGGCGCG GGCGGTGCTG CGTTTCCTGG GCGCGTCCGC GATCGTCGAG
CCGGCGCGCG ACGGCAAGGA GCTGGCCGCC TGA
|
|---|
| Protein sequence | MRVSPDGGVM ARMRIGFLFN HDQVHQVAHA LPIALAMRRL HPTAEIVVAT TNDRLTAEVH
RLAGDAADGL TIVQLALRKP LTRFLARHLE WALPVRKIGV YRDNLDLFEG LDALVVTEKT
SLLLKTRYGL RVPIIHTRHG AGDRAIGFDK ASARFDRVLV SGPKIRRRLV EEAHVAPDRI
ETVGYAKFDL IGERSPRLPF QDNGKPTVLY NPHLSPHLSS WYRHGRAVLD HFLHDDQFNL
IFAPHVMLFH RRFVVTIDKL RIDRPGVVEQ RHLDAPNIHV DLGSPASTDM TYTLAADIYL
GDVSSQVYEF LHRPRPCVFL NSHDVDWRGD PNYAHWAAGP VIHDPANLGA AIDWAMVARD
QYEPVQQQLF ADSFDLSDEP SSLRAARAVL RFLGASAIVE PARDGKELAA
|
|---|
| |