| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1739 |
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| Symbol | |
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| ID | 5198397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1945757 |
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| End bp | 1947382 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640581287 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001262240 |
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| Protein GI | 148554658 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAG CCGATTATGT CATCGTCGGG GGCGGCAGCG CGGGCTGCGT CCTCGCCAAT
CGCCTGTCCG AGGACCCGAG GAACAAGGTC GTGCTGCTCG AAGCGGGCGG CGACGGCAAG
GGCTTCTGGG TCGACATCCC GGTCGGCTCG GTCAAGCTGG TCGGCGACGA GCGGACCGAC
TGGATCCACA AGAGCGAGCC CGATCCGACC ATCAACGGGC GCGAGATCAT CTGGAACGCC
GGGAAGATGC TGGGCGGCGG CGGCGGGGTG AACGGCCTCG TCTACATCCG GGGCCAGCGC
GGCGATTATG ATTTGTGGGA GAAGCTCGGT TGCGAAGGCT GGGGCTTTCG CGACGTCCTG
CCCTATTTCA TGCGGGGCGA GCGCTGGGAA GGCGACGGCG ATTTCCAGTC GCACGGCCGC
ACCGGCACCC TGGCGGTGAC CCATCAGCGG ACGCGCGGGC CGATCCTGTC CGCCTTCTTC
GAAGCCGCGA GCAATGCCGG CTTCCGCTAT ATCGAGGACC CGGCGGCGGG CGACATCGAC
GGCGTGTTCC ACACGCTGAC CAATCAGGAG AACGGGCGCC GCTGCAGCCC CGCCCGCGCC
TTCCTGGAGC CGGTGCGCAA CCGGCCGAAC CTGACGGTGA TGACGCATAT GCTCGTCGAC
CGGGTGCTGT TCGACGGGCG TCGCGCGACG GCGGTGGCGG CGCGCGGCCG GGACGGGCGC
ATGATCGAGA TTCGCGCGCG GCGGGAAGTC GTCGTCAGCG GCGGCGCCAC CCAGTCGCCC
GCCATATTGA TGCGGTCGGG CGTCGGGCCC GGCGCCCATC TGCGCGATCA TGGCATCGAC
GTGGTCGCCG ACCGCGCGGG CGTCGGCCAG AACCTGATGG AGCATCCCGG CATCGGCCTG
CGCTGGCTGA TCGACCTTCC CTCCTTCAAC GCGCAGCTGC GTTCGCGCTG GCGGCAGGGG
CTGGCCTTGC TGCGCTATCT GGCCCGCCGC GACGGGCTGA TGGCGCTGTC GATGACCCAG
GCGATCGCGG GCGCGAAGAC GCTGCCCGAC CTCGCCGAGC CCGACATATT GCTGTTCTTC
TCGAGCTGGA TCTTCGATCC GACCAAGCCG CCGCTACGCC CCGGCAAGGC GGCGGTCTTC
CCGCTGCTCA GGGAGCCGGC GGCGGGCATG CACAGCTTCG TCAACCGGCC CCACAGCCGC
GGCGAGATCA CCCTCCGCAG CCGCGCGCCC GAGGATTCGC CGGTCATCCG TCCCAATCTG
CTGGGCGACG AGCGCGACGT CGAGACGCTG GTGCGCGCCG GCAAGGCGAT CGAGCGCATC
TTCGCGACGC CGGGCCTGGC CGAGCATGTC GTCGGCCGGC TCAGCCCCAC GCTGGCCAGC
GACGACGAGT GGCGCGACTT CGTCCGCTCG ACCGCCGGCA TCGGCTGGCA TGCGAGCGGC
ACCTGCCGGA TGGGCGGGGA CGCGGATTCG GTGCTCGATC CGCGGCTCAG GGTGCGCGGC
GTCGAAGGAT TGCGCGTCGT CGACGCCTCG GTGATGCCGA CCCTGACCAG CGCTAATACA
AATGCTCCAA CGATGATGAT CGGCGAACGA GGCTCGGCAC TGATCCTCGA AGACGCCGCT
ACCTGA
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| Protein sequence | MIEADYVIVG GGSAGCVLAN RLSEDPRNKV VLLEAGGDGK GFWVDIPVGS VKLVGDERTD
WIHKSEPDPT INGREIIWNA GKMLGGGGGV NGLVYIRGQR GDYDLWEKLG CEGWGFRDVL
PYFMRGERWE GDGDFQSHGR TGTLAVTHQR TRGPILSAFF EAASNAGFRY IEDPAAGDID
GVFHTLTNQE NGRRCSPARA FLEPVRNRPN LTVMTHMLVD RVLFDGRRAT AVAARGRDGR
MIEIRARREV VVSGGATQSP AILMRSGVGP GAHLRDHGID VVADRAGVGQ NLMEHPGIGL
RWLIDLPSFN AQLRSRWRQG LALLRYLARR DGLMALSMTQ AIAGAKTLPD LAEPDILLFF
SSWIFDPTKP PLRPGKAAVF PLLREPAAGM HSFVNRPHSR GEITLRSRAP EDSPVIRPNL
LGDERDVETL VRAGKAIERI FATPGLAEHV VGRLSPTLAS DDEWRDFVRS TAGIGWHASG
TCRMGGDADS VLDPRLRVRG VEGLRVVDAS VMPTLTSANT NAPTMMIGER GSALILEDAA
T
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