| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1700 |
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| Symbol | |
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| ID | 5196794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1895647 |
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| End bp | 1897950 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640581248 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_001262201 |
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| Protein GI | 148554619 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGATG ATGGGATCGC CGCGCGATAC CGCCAACTCG TCGACATGTC GCCCGACGCG
ATCTTCCTCG TCGAGGATGG GACGATGTGC CTGGCCAACC CGGCCGGGCT CGCGCTGCTG
CAGGCATCTT GCATCGAGGA TGTCGCGGGC CGCCCGATCG AGGCGCTTTT CCGGGCCGGG
GCTGGAGATG GCCAGCCGAC ATGGCTCGCG GGGCTGTTGC GGGAAGCGGG ATCGGCATCG
GGTGAGGCGG TTCTGTGCAC GCTCGACGGC GGCGGCGTGC CGGTCGAGGT GCGCGCCCTG
TCCTATCTCG ACGAAGGCAG GCTGGTCGTG CAGGCCTCCT GCCGCGATAT CTCTGGTGCC
GACATCGAAT TGCGCGACAG CCTGGCGCGT TTCCATGCGA TAGCCCGCGC CACCGGCGAC
GTGGTGTGGG ACTGGGACCT CGCGACGGAC AACCTCTGGT GGAACGACAA TTTCCAGTTC
CTGTTCGGAT ATGGCGCCAG GGAGATCGAG CCGACCATCA TTTCCTGGAC CAGCCGGATT
CATCCCGACG ATCATGACCG CGTGATCGCG AATATCCATG CGGCGATCGA CGGCAGCGGG
AAGACGTGGA GCGACGAATA TCGCTTCCGG CGCAAGGACG GCAGCTATGC CGAGATATTC
GATCGGGGCC AGGTGCTGCG CGATCCGTCG GGACGCGGCG CGCGCATGGT CGGCACGATG
CAGGACATCA CCCGGCGCAA GCAGACGGAA GATGCCCTGC GGGAGAAATC GGCGCTGCTG
GAGGCGGTGG TCGAAAGCGC GGTCACCGGC ATCCTCGTGG TCAATCCCAA CGGCGAGAAG
CTGATCCACA ACCAGCGGCT GTACGAGCTG TTCAGGATTC CGCCGGAGAT CGCCAACGAT
CCGCGCGTCG CGCCCCAGTT CGAATTCGCG ACCACCCAGG CGAAGGATCC GGCCGCCTGG
ATCGGCAGGG CGGCGTCGCT TGCCGCGCGC CCCGAAGCGA TCGAGCGCTT CGAGATCGAG
CTGGTCGATG GGCGGATATT GGACAGCTAC ACCGCCCCCG TGCACGACAA GGAGGGGCGT
CGCTACGGAC GGGCCTGGAT CTTCGAGGAC ATCACCGAGC GCCGCCGCGA CGCGCATCGG
CTGCGCCAGG CCGAGCGCGT CGAGGCGGTC GGCACCTTTG CCGCGGGCAT CGCGCATGAC
CTCGGCAACA TGCTCGTCCC GATCATCGTC ACGGCCGAGC GGATCGCCGG CGGGGTCGCC
GACCCGGAAG GCAAGGCCCG GATCATCCTG AGCGCGGCCG ACCAGGCCAA GACGCTGGTC
GAGCAGATAC TGGACTTCAC CGGCCAGCGG CGCATGGTGC GGGAGCCGAT CGACCTGTGC
GCGCCGGTAT CGCGCGCGAT CGAACTGCTG GCCTCGACCA TGCCCGAGGG CATCGTGGTC
GAGCGGAGGT TCCCGACCCG GCCGGCGATG ATTTCCGGCG ACGCCACGCA GATGCTGCGG
CTGACGCTCA ACCTGTGCAG GAACGCCGTC CAGGCCATGG CGGAGGCTCC GTCGAACCGG
CCCGCGCGGC TGATCGTCCG CGTCGAGGAG GGCCAAGTCG ACGCCGCCTT CGCGCACGCG
CATCCGCCGC TGCCGGCCGG CCCCGCCATG ATCCTCGGCG TCGAGGACGA TGGACCCGGC
ATGGACGCCG CCACGCTGGA GCGGATCTTC GAACCCTTCT TCTCGACCAA GGGGGCGAAG
GGGACCGGCC TCGGCCTCGC GCTGGTCCAG AGCATCGCGG CGCAGCATGA CGGTGCCGTC
ACCGTCGACA GCGCGCCTGG GGCCGGCACC ACCTTCCGCA TATGGCTGCC GAAGGCGCCG
CCATCGATCG CCGCCGAACC CGCCGTGCCG CTGCCGCGGA CCGGCGCGGC CAGGAACATC
CTGGTCGTCG ACGACCGGCC CGAGATCGCC AGGACGCTCG TCGAGCTGCT CGAGGCGGCC
GGCCATATGG CCGAGGCGAT CGACGACCCG TTCGCCGCCC GCGACCGGAT CGCCATGCTG
CCCGGCCGCT TCGACCTCGT CATCACCGAC TATCACATGC CGGGCATGAC CGGCGCCGAC
CTGGTCGCGG GCGTCCGCTT CGCCTGCCCG GACCTGCCGT TCATCCTGAC CAGCGGCCAG
ATGCCGCCGA TCGACCCCGA TCTCGCCGCC AGCTTCGTCG CCTTCCTCCC CAAGCCCTTC
ACCGCGAAGG CGCTGTACGA GGCTTGCACC CTCGCGCTCG GGGAAACGGT GGCGGCCATG
AAGGACGGGA AGTTCGATCT TTAG
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| Protein sequence | MRDDGIAARY RQLVDMSPDA IFLVEDGTMC LANPAGLALL QASCIEDVAG RPIEALFRAG
AGDGQPTWLA GLLREAGSAS GEAVLCTLDG GGVPVEVRAL SYLDEGRLVV QASCRDISGA
DIELRDSLAR FHAIARATGD VVWDWDLATD NLWWNDNFQF LFGYGAREIE PTIISWTSRI
HPDDHDRVIA NIHAAIDGSG KTWSDEYRFR RKDGSYAEIF DRGQVLRDPS GRGARMVGTM
QDITRRKQTE DALREKSALL EAVVESAVTG ILVVNPNGEK LIHNQRLYEL FRIPPEIAND
PRVAPQFEFA TTQAKDPAAW IGRAASLAAR PEAIERFEIE LVDGRILDSY TAPVHDKEGR
RYGRAWIFED ITERRRDAHR LRQAERVEAV GTFAAGIAHD LGNMLVPIIV TAERIAGGVA
DPEGKARIIL SAADQAKTLV EQILDFTGQR RMVREPIDLC APVSRAIELL ASTMPEGIVV
ERRFPTRPAM ISGDATQMLR LTLNLCRNAV QAMAEAPSNR PARLIVRVEE GQVDAAFAHA
HPPLPAGPAM ILGVEDDGPG MDAATLERIF EPFFSTKGAK GTGLGLALVQ SIAAQHDGAV
TVDSAPGAGT TFRIWLPKAP PSIAAEPAVP LPRTGAARNI LVVDDRPEIA RTLVELLEAA
GHMAEAIDDP FAARDRIAML PGRFDLVITD YHMPGMTGAD LVAGVRFACP DLPFILTSGQ
MPPIDPDLAA SFVAFLPKPF TAKALYEACT LALGETVAAM KDGKFDL
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