Gene Swit_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1682 
Symbol 
ID5196553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1873779 
End bp1874339 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content71% 
IMG OID640581230 
Producthypothetical protein 
Protein accessionYP_001262183 
Protein GI148554601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.557508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG GCGCCAGCCT CCCGCCGGCC CTGCCTCCCG TGCGGCGCGT CGTCACCGCC 
AACGACGCCG GGGGGCGATC CTTCATCCGC GAGGACGGCG AGAGCCCGGC GGTCCATACC
GTCGCGGGCC GGCCGGGTTT CCGCAGCGCC AATATCTGGC GGACGATCGA CTCCCCGACG
CCGATCGACG CCGAGGACAC GATCACCGAG CATGAAGGCG TCCAGCCGCC GCCGCTCGGC
ACCGTGTTCC GGATCATCGA CTTCCCGCCG CGTCCCGAGG ACCCGGAGGA GCGGCGGCGC
CAGGCCTCGG CCTCGCTCAA CACGCTGTTC GCCGATGCGC ATCACGAAGC GCGGCACGAC
AAGCCCGGCA TGCACGTCAC CGCGTCGATC GACTATGCGA TCGTCCTGTC CGGCACGATC
ACCGCGATCA TGGACGACGG CGAGACCGAC CTGCACTCCG GCGACGTGCT GATCCAGCGC
GGCACCAACC ATGGCTGGGA GAATCGCACC CGCGCGATGG CGCGCGTGGC GTTCATCCTG
ATCGACGGGC GTCCCGAATG A
 
Protein sequence
MSAGASLPPA LPPVRRVVTA NDAGGRSFIR EDGESPAVHT VAGRPGFRSA NIWRTIDSPT 
PIDAEDTITE HEGVQPPPLG TVFRIIDFPP RPEDPEERRR QASASLNTLF ADAHHEARHD
KPGMHVTASI DYAIVLSGTI TAIMDDGETD LHSGDVLIQR GTNHGWENRT RAMARVAFIL
IDGRPE