Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1681 |
Symbol | |
ID | 5196552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 1872805 |
End bp | 1873782 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581229 |
Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
Protein accession | YP_001262182 |
Protein GI | 148554600 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.819964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCT TTTTCCAACT GGGCACGTTC GCCCGCGACG ACGGCTCCCT CCCCGCGCTG GTGATCGAGG GCGCGGTGCT CGACCTTCGC GCCGCCGCCG AGCGCGCGGG CCTGGCGCTG CCCCCCTTCG CGGCGATCAG CGACCTGCTC GGCGACTGGG ACGCGACCTT CGAGCGCCTG TCCGCCGTGG CCGATCACGC GCGGGCGGAC GGCCTCCAGG CCTTCTCGCT CGGCACGGTG GAGAGTCTGC GCCCCTGCCC GCCGCCGGGC CGGGTCGGCA AGATGCTCTT CGCGGCCGCG AACTACAGCG ATCATGTCCG CAACATGCGC AAGACCTTCA CCCCCGACAT CCCGCTCGCC GACCAGGGCA AGCAGTTGCC GCCGCTGCGC CCCTATATGT TCGGCAAGAT CAACGTGCCG ACCGGGGCCT TCGACGACAT CATCCTGCCG CCCGGCATGG AGCGGATCGA CTGGGAGGCC GAGCTGATGG TCGTGATCGG CACGCCGGGC CTTGCGATCC GCCCGGCCGA GGCGCACCGC CACATCGCCG GCTACATGAC CGGAAACGAC GTCTCCTGCC GCGACCGGAC CTGGCGCGAG GATCGCCCGA CCATCCGGTC CGACTGGCTC GGCGGAAAGA GCTATGACAG CTTCGCGCCG CTCGGCCCGC TGCTGACCCC GCGCCAGTTC GTGCCCGACC ATGCCGACCT GGCGATCCGC CTGTGGGTGA ACGGCGAGCT CAAGCAGGAC GGCAATTCGC GCGACATGAC CTTCGGCATC GAGGAGCAGA TCGAATATGC CTCGTCGATG ATGACGCTGC TGCCCGGCGA CGTGATCGCC ACCGGCACCC CCGCCGGCAC CGGCCAGGAG CGGGGCGAAT TCCTCAAGGA AGGCGACATC GTCGAGACCG AGGTGGAATC CTGCGGACGA CAGCGCAACC GCGTCGTCGC GCGCCGCCGG GCGGAGATCG CGGCATGA
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Protein sequence | MSSFFQLGTF ARDDGSLPAL VIEGAVLDLR AAAERAGLAL PPFAAISDLL GDWDATFERL SAVADHARAD GLQAFSLGTV ESLRPCPPPG RVGKMLFAAA NYSDHVRNMR KTFTPDIPLA DQGKQLPPLR PYMFGKINVP TGAFDDIILP PGMERIDWEA ELMVVIGTPG LAIRPAEAHR HIAGYMTGND VSCRDRTWRE DRPTIRSDWL GGKSYDSFAP LGPLLTPRQF VPDHADLAIR LWVNGELKQD GNSRDMTFGI EEQIEYASSM MTLLPGDVIA TGTPAGTGQE RGEFLKEGDI VETEVESCGR QRNRVVARRR AEIAA
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