| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1669 |
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| Symbol | |
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| ID | 5200376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1855425 |
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| End bp | 1856153 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581217 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001262170 |
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| Protein GI | 148554588 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAATC CGTCGCCGGC CGCGATCGCG ATCGTCACGG GCGGGGAGGG CGGCATCGGC
GCCGCCATCG TCTCCCGCCT CGCCGCCCTC GGCTTGCGGG TCGTCTCGGC GGACATCGCA
ACGGCGCCCG GCGCGACGGG CGATGAGGCG GTCATCCGGC GCAGGCTCGA CCTCACCGAC
GCCGCCAGCA TCGACGCCTT CGTGGAGGAG GCCGGCGCGC TGGGGACGAT CGTCGCGCTG
GTGAACTGCG CCGGGATCAT CGCGGAATGC ACCGCCGAGG AGGTTCCCGG GCCGGGCGTC
CGCCGCATGC TCGACATCAA CCTGCTCGGC GCGGCGCACA TGACCGCGGC GATCGCGCCG
CTGATGACGC GGGGCGGGGC GATCGTGAAC ATCAGCAGCA TCAGCAGCCG CCTGCCCGAA
CTCGCCAACG CGGTGCTCTA CGGCGCGAGC AAGAGCGCGC TGGAGACCTA TACCCGGGCT
TCGGCGCGGG CGCTGGCGCC GAAGGGCATC CGCGTCAACA GCCTGGCGCC CGGCTTCATC
GACGTGGCGA TGACCGACGC GATGCGGACC ATCGCCTATG GCGAGGGATC GCCGCTGCGC
AGGGTCGCCG CCGGGCGCAT GGGCACGGCC GACGAGATCG CCGCCTGCGT CGAATTCCTG
CTGTCCGACC AGGCCTCCTA TGTCGTGGGG GCGACGCTGG TGGTCGACGG CGGACTGGCG
CTCAACTGA
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| Protein sequence | MGNPSPAAIA IVTGGEGGIG AAIVSRLAAL GLRVVSADIA TAPGATGDEA VIRRRLDLTD
AASIDAFVEE AGALGTIVAL VNCAGIIAEC TAEEVPGPGV RRMLDINLLG AAHMTAAIAP
LMTRGGAIVN ISSISSRLPE LANAVLYGAS KSALETYTRA SARALAPKGI RVNSLAPGFI
DVAMTDAMRT IAYGEGSPLR RVAAGRMGTA DEIAACVEFL LSDQASYVVG ATLVVDGGLA
LN
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