| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1657 |
|---|
| Symbol | |
|---|
| ID | 5199409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 1843822 |
|---|
| End bp | 1844787 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640581205 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001262158 |
|---|
| Protein GI | 148554576 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000320474 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0104238 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG TATGCGTTAG CGAGTTCGGG CCGCCCGAAG CGCTGCGAAT CGTCGACGCT
CCGGAACCCG TGCCCGCCGC CGGCCAAGCA CTGGTCGCGA TCGAGACGAT CGGGCTGGGC
TATATGGACA CGGCAGCGCG CCGGGGCGAA AGTTATCTGG TATCATCGCC GGGCTTTGTT
CCGGGATATG AGGTGGCCGG AACCGTCGCG GCCATCGGCA ACGGCGTCGA TGCATCATGG
CTCGGCCGGC GGGTCTTCGC GATCCTGCGG CAGGGCGGCG GCTGCGCCGA GCGCCTGACG
GTGCCGGCGA ACGAACTCAT CCCGCTGCCC GACGACATAT CCTGCGAGAA CGCGGTCGCC
GCCGGGCTGA ACGCGCTGGT CGCGCAGGTC GGGGTCGCCC GATTGCCGAT CACCGACACC
GACCAGGTCC TGGTGCGCGG CGCCGGCGGC GGCATCGGCC TGATGTGCGT CCAATATGCG
GCGCTGCGCG GCGGCACGGT GGTCGCGACC AGCTCGTCGA GGGAGCGCGG CGAACGGCTC
CTCGCGCTCG GCGCCTCGTC GATCTGGAAC CGGCTCGACA GCGATCTGGA CGGTCCCGCC
GCGTTCGACA TCATCATCGA CACGATCATC GGGCAGGATC TTCCCGCCTT CTTCGACCGG
CTCGGCGACA ACGCCCATTA TCTCTTCTGT GGCGGCGTCG GCGGCTTACC CCCCGCCGAC
TTCGGCATGA AGCTGATCGA GCATTTCCAC AAATCGCCGA CCGTCCACGC CTTCAGCCTC
AACTCGGCCA CGCTCGACGA GGTCGCACGC GAAGCGGCCA TCCTGTTCGA GCATATCGCA
GCCGGGCGGA TATCATCGGT CGTCGACAGC GTCATGCCCA TGGCCGACAT CGTCGAGGCC
CATCGCAAGC TGGACGCCGG CCAGGCCTTC GGCAAGATCA TCCTCCGGCC GGATGGCGGG
GCATGA
|
|---|
| Protein sequence | MKLVCVSEFG PPEALRIVDA PEPVPAAGQA LVAIETIGLG YMDTAARRGE SYLVSSPGFV
PGYEVAGTVA AIGNGVDASW LGRRVFAILR QGGGCAERLT VPANELIPLP DDISCENAVA
AGLNALVAQV GVARLPITDT DQVLVRGAGG GIGLMCVQYA ALRGGTVVAT SSSRERGERL
LALGASSIWN RLDSDLDGPA AFDIIIDTII GQDLPAFFDR LGDNAHYLFC GGVGGLPPAD
FGMKLIEHFH KSPTVHAFSL NSATLDEVAR EAAILFEHIA AGRISSVVDS VMPMADIVEA
HRKLDAGQAF GKIILRPDGG A
|
|---|
| |