| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1624 |
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| Symbol | |
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| ID | 5196470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1806708 |
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| End bp | 1808528 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581172 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001262125 |
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| Protein GI | 148554543 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC ACGCGGCGGT GGAGGCGGTG ACGTCTCGGA TCGTGGAGCG GTCGCGGGCG
GGCCGCCGGG CCTATCTGGA GCTGATCGCG CGCGAGCGGG ATACGGGGGT GGACCGGCCG
CGCCTGTCGT GCGGCAACCT GGCGCACGGC TTCGCGGCGT CGGGAGAGGA CAAGCCGGCG
ATCCGCGAGG GGCGGGCGAT GAACATCGGC ATCGTCACCG CCTATAACGA CATGCTGTCG
GCGCATCAGC CCTATGGCGG CTATCCGGAC CGGATGAAGC TGTGGGCGCG CGAGGCGGGG
ATCACGGCGC AGGTGGCGGG CGGGGTTCCG GCGATGTGCG ACGGGGTGAC GCAGGGGCAG
CGCGGCATGG AGCTGTCGCT GTTCAGCCGC GACACGATCG CGCTGTCGAC GGCGGTGGCG
CTGAGCCACG GCATGTTCGA GGGCGCCGCC CTGCTCGGCA TCTGCGACAA GATCGTCCCC
GGGCTGCTGA TCGGGGCGCT GCGCTTCGGC CACCTGCCGA CGATCCTGGT GCCGGCCGGA
CCGATGCCCT CGGGGCTCGC CAACAAGGAG AAGCAGCGCG TCCGCCAGCT CTATGCCGAG
GGCAAGGCCG GCCGCGCCGA GCTGCTCGAG GCGGAGAGCG CCTCCTATCA TGGCGCGGGC
ACCTGCACCT TCTACGGCAC CGCCAATTCG AACCAGATGA TGATGGAGGT GATGGGCCTG
CACATGCCGG GCGCCGCCTT CGTCAACCCG GGCACGAAGC TCAGGCAGGA ACTGACCCGC
GCGGCGGTCC ACCGGCTGGG GGAGATCGGC TGGGACGGCG GCGACTATCG GCCGCTGGGC
TTGTGCGTCG ACGAGAAGGC GATCGTCAAC GCGGCGGTCG GGCTGCTGGC GACCGGGGGC
TCGACCAACC ATGTCATCCA CCTGCCCGCG ATCGCGCGGG CGGCGGGGAT CATGATCGAC
TGGGAGGACA TCGACCGGCT GTCGGCGGCG GTGCCGCTGA TCGCGCGGGT CTATCCCAAC
GGCGCGGGCG ACGTGAACCA TTTCCAGGCG GCGGGCGGCA TGGCCTATGT GATCGCGACG
CTGCTCGACG GCGGCTATCT CCACCGCGAC ATCCTGACCG TGGCGGGCGA CGATCTCGGC
GCCTATGCGC GGGAGCCGCT GCTCGACGGC GAGGCGCTGG TCTGGACCGA CGCGCCCGCC
GCGCCGCTCG ACCCGGCGAT GCTGCGGTCG CACGCCGATC CCTTCCAGCC CGATGGCGGC
ATGCGGCTGG TGCGGGGCAA TCTCGGGCGC GGCACCTTCA AGACCAGCGC GGTCGATCGG
TCGCGCTGGA CGATCGAGGC GCCGGTGCGG CTGTTCGACG ACCAGGACCA GGTGACGGCG
GCGTTCAGGG CGGGCGAGCT CGACCGCGAC GTGGTGGTGG TGGTGCGCTT CCAGGGCCCG
AGGGCGAACG GCATGCCCGA GCTGCACAAG CTCACCCCGC CGCTGGGCGT GCTCCAGGAC
AAGGGCCACA AGGTGGCGCT GGTGACCGAC GGTCGGATGT CGGGGGCCTC GGGCAAGGTG
CCCGCCGCGA TCCACCTGAC CCCGGAGGCG TTCGCCGGGG GCCCGATCGC GAAGCTCAGG
GACGGCGACG TCGTCCGGCT GTGCGCCGAG CGGGGCGAGA TACTGGCGCT GGTCGACGCG
GCCGAATGGG AGGCGCGCGA GCCTGCCGCC CCGCCGCCCC GGCAGCCCGG CACCGGCCGC
GAGCTGTTCG CCTTCATGCG CGCCGGCGCC GACACCGCAG AGCGCGGCGC CTCGGCCATG
CTCGACGCAG CAGGGTTGTG A
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| Protein sequence | MSLHAAVEAV TSRIVERSRA GRRAYLELIA RERDTGVDRP RLSCGNLAHG FAASGEDKPA
IREGRAMNIG IVTAYNDMLS AHQPYGGYPD RMKLWAREAG ITAQVAGGVP AMCDGVTQGQ
RGMELSLFSR DTIALSTAVA LSHGMFEGAA LLGICDKIVP GLLIGALRFG HLPTILVPAG
PMPSGLANKE KQRVRQLYAE GKAGRAELLE AESASYHGAG TCTFYGTANS NQMMMEVMGL
HMPGAAFVNP GTKLRQELTR AAVHRLGEIG WDGGDYRPLG LCVDEKAIVN AAVGLLATGG
STNHVIHLPA IARAAGIMID WEDIDRLSAA VPLIARVYPN GAGDVNHFQA AGGMAYVIAT
LLDGGYLHRD ILTVAGDDLG AYAREPLLDG EALVWTDAPA APLDPAMLRS HADPFQPDGG
MRLVRGNLGR GTFKTSAVDR SRWTIEAPVR LFDDQDQVTA AFRAGELDRD VVVVVRFQGP
RANGMPELHK LTPPLGVLQD KGHKVALVTD GRMSGASGKV PAAIHLTPEA FAGGPIAKLR
DGDVVRLCAE RGEILALVDA AEWEAREPAA PPPRQPGTGR ELFAFMRAGA DTAERGASAM
LDAAGL
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