Gene Swit_1601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1601 
Symbol 
ID5198286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1781914 
End bp1782495 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content61% 
IMG OID640581149 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001262102 
Protein GI148554520 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATG TCGACGAGCC CGAGGTCGCG CGTGCCGCCT ATATCGACCC AACCGCGCGC 
CTGTTTGGGG ACCTGCGATT GGGCGAGGGA GCCAGCATCT GGCCTCATGC CGTCCTGCGC
GCCGAGATGC ACCATATCCG GATAGGCCCC CTGACCAATG TGCAGGATCA TGTCATGATC
CACATCGGCT ATCGACATGC CGTCGACATC GGATCCTATT GCTCGATCGC CCATCACAGC
ACGCTGCACG GATGCACCAT TGGCGACAAT TGCCTCATAG GGATCCACAC GACGATCATG
GACGGCTGCG TCATCGGTGA AAATTCGATT GTCGGCGGAC ACTCGTTTCT CACCGAAAAC
ACGATAATCC CGCCCAATTC GATTGTCATG GGCGCTCCCG GCAAAATTCG GCGCTCGCAA
GATTGCTCCG TCGAAAACAT CGCCAACGCC CTTCTGTATG AGCTCAACGC GCGCGCATAC
GCCCGGGGAC ATCACCGCGC CTGGGCCGAC GCCGATTTCG CGAAGATTCA ACGGCAGGCC
CGGGAGATCG CAATGGCCCG CCAGGCCATC CCCGGCGGCT AG
 
Protein sequence
MSDVDEPEVA RAAYIDPTAR LFGDLRLGEG ASIWPHAVLR AEMHHIRIGP LTNVQDHVMI 
HIGYRHAVDI GSYCSIAHHS TLHGCTIGDN CLIGIHTTIM DGCVIGENSI VGGHSFLTEN
TIIPPNSIVM GAPGKIRRSQ DCSVENIANA LLYELNARAY ARGHHRAWAD ADFAKIQRQA
REIAMARQAI PGG