Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1572 |
Symbol | |
ID | 5197585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1748738 |
End bp | 1749583 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640581120 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001262073 |
Protein GI | 148554491 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGAGCA GTCCCACCCG TTACGAGCCG TTCGGCGCCA AAGCCGCCGA CGGGGTTTCC CTCACGGGAT ATGTCGCGGG AGCACCCGAC GGGCCCGCGA TCGTCCTGCT TCATCCCATC GGCTTCGATG GACGCTTCTG GCGCGCCGTG GTCGACCGGT TGCAGGATCG CTTCCGTCTG ATCGTTCCCG ACGCGCGGGG GCATGGTGGC TCGGGCCGGG GCGGCGAGAC GAGCATCGAA CAGCTCGCCG GCGACGTGGA GGCGATCCTC GATCATCTCG GCGTCGATCG GGCCGCGGTC GCCGGCTGCT CGATGGGCAG CGCGACGTCC ATGCATCTCG GCGCCGCCGT CCCCGATCGC TGGACCTGGC TTGCGCTGGC GAACGCGCCT GCGAAGATCC CGCTGCCGCG CGAGCGATTT GAAGAGGTCA TCGCCGCTGC CCGCGCCGGT CGCTTCGCGG AGATCGCGCG CGACATGCTC GGCCGCTGGG TCGCACCCGA AACCCGAAGG CTCCGCCCCG AATGGTTCAC GGAGCGCCTG TCGGACATGC TCGATACGGA CGCTGAGGGG TTCGCGGATG CGTTCGCCGC GCTACGCGAT TCGGATCGCC GCGACGATCT GGGGCGAATC CGCGCGGCCA CGCTGGTCAT CACCGGAGAC CAGGACGGAG GCTTCAGTGC GGCGGATGCG GAGAGCATGG CGCTCGCCGT CCCGCACGGC CGGTCATGCA CCGTATCGAG CGCGGCCCAC CTCGTCCCGC TCGAACAGCC GGAGGCCTTC GCAAGCCGGT TGCGCGACTT CGATGAGCGC GTTTCGGAGC TCCCGATCGA GAAGCGGCCG GTCTAA
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Protein sequence | MASSPTRYEP FGAKAADGVS LTGYVAGAPD GPAIVLLHPI GFDGRFWRAV VDRLQDRFRL IVPDARGHGG SGRGGETSIE QLAGDVEAIL DHLGVDRAAV AGCSMGSATS MHLGAAVPDR WTWLALANAP AKIPLPRERF EEVIAAARAG RFAEIARDML GRWVAPETRR LRPEWFTERL SDMLDTDAEG FADAFAALRD SDRRDDLGRI RAATLVITGD QDGGFSAADA ESMALAVPHG RSCTVSSAAH LVPLEQPEAF ASRLRDFDER VSELPIEKRP V
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