Gene Swit_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1572 
Symbol 
ID5197585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1748738 
End bp1749583 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content70% 
IMG OID640581120 
Productalpha/beta hydrolase fold 
Protein accessionYP_001262073 
Protein GI148554491 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGAGCA GTCCCACCCG TTACGAGCCG TTCGGCGCCA AAGCCGCCGA CGGGGTTTCC 
CTCACGGGAT ATGTCGCGGG AGCACCCGAC GGGCCCGCGA TCGTCCTGCT TCATCCCATC
GGCTTCGATG GACGCTTCTG GCGCGCCGTG GTCGACCGGT TGCAGGATCG CTTCCGTCTG
ATCGTTCCCG ACGCGCGGGG GCATGGTGGC TCGGGCCGGG GCGGCGAGAC GAGCATCGAA
CAGCTCGCCG GCGACGTGGA GGCGATCCTC GATCATCTCG GCGTCGATCG GGCCGCGGTC
GCCGGCTGCT CGATGGGCAG CGCGACGTCC ATGCATCTCG GCGCCGCCGT CCCCGATCGC
TGGACCTGGC TTGCGCTGGC GAACGCGCCT GCGAAGATCC CGCTGCCGCG CGAGCGATTT
GAAGAGGTCA TCGCCGCTGC CCGCGCCGGT CGCTTCGCGG AGATCGCGCG CGACATGCTC
GGCCGCTGGG TCGCACCCGA AACCCGAAGG CTCCGCCCCG AATGGTTCAC GGAGCGCCTG
TCGGACATGC TCGATACGGA CGCTGAGGGG TTCGCGGATG CGTTCGCCGC GCTACGCGAT
TCGGATCGCC GCGACGATCT GGGGCGAATC CGCGCGGCCA CGCTGGTCAT CACCGGAGAC
CAGGACGGAG GCTTCAGTGC GGCGGATGCG GAGAGCATGG CGCTCGCCGT CCCGCACGGC
CGGTCATGCA CCGTATCGAG CGCGGCCCAC CTCGTCCCGC TCGAACAGCC GGAGGCCTTC
GCAAGCCGGT TGCGCGACTT CGATGAGCGC GTTTCGGAGC TCCCGATCGA GAAGCGGCCG
GTCTAA
 
Protein sequence
MASSPTRYEP FGAKAADGVS LTGYVAGAPD GPAIVLLHPI GFDGRFWRAV VDRLQDRFRL 
IVPDARGHGG SGRGGETSIE QLAGDVEAIL DHLGVDRAAV AGCSMGSATS MHLGAAVPDR
WTWLALANAP AKIPLPRERF EEVIAAARAG RFAEIARDML GRWVAPETRR LRPEWFTERL
SDMLDTDAEG FADAFAALRD SDRRDDLGRI RAATLVITGD QDGGFSAADA ESMALAVPHG
RSCTVSSAAH LVPLEQPEAF ASRLRDFDER VSELPIEKRP V