Gene Swit_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1556 
Symbol 
ID5198517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1730674 
End bp1731066 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID640581104 
Producthypothetical protein 
Protein accessionYP_001262057 
Protein GI148554475 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.606485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA ATCACGCAGC GCGTGTCAAG CAACTGATGG CCGCGGAGGC GGCGCGCGTC 
CAGGCGATGA TCCACAAGGA TTATGCGGTG CTGGACCGGC TCCTGGCCGA CAATCTGTCC
TATTGCCATT CCAGCGGCCG GTGGGACACG AAGGCCGGCT TCATCGACAA TATGAAGGCG
GGATTTTCCT ATCTGTCCTC GCGTCGATCC GATTCTGCCG TGCGCTTGTT CGGCGCGACG
GCCATCGTCA CGGGCTCGCT GGACATCATC CTGCAGGCGA GCCCCACGAC ACCGCCGGAC
GACATCGCCT GCCTCGTCAC CCAGACGTGG ATGGAGCGGA ATGGCGGCTG GCAGCTGGTC
GCCCACCAGG CTACGCGGCG GCGGATTGCC TGA
 
Protein sequence
MAENHAARVK QLMAAEAARV QAMIHKDYAV LDRLLADNLS YCHSSGRWDT KAGFIDNMKA 
GFSYLSSRRS DSAVRLFGAT AIVTGSLDII LQASPTTPPD DIACLVTQTW MERNGGWQLV
AHQATRRRIA