| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1486 |
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| Symbol | |
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| ID | 5200027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1641067 |
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| End bp | 1642938 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640581033 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001261987 |
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| Protein GI | 148554405 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGA TGGCGGACCG CCCCCCGCGC TTGGGGGCGA TCGATTTCCA TGATAGCCTC
GCCGGATTGT CTTTGTTCGC CTTTGGGGAA AGGAGAACGG CGGTGCCCCA TCTTCTCAAA
GCCGCCGCGC TCGCCGGTGT CGGCTTCTCG CTCGCCAGCT TCATGCCTCC GCCGGTCTTC
TCGGCCGCAT CGCTCGACGC GCTCGATCCC AGCCGGATCG CCGCCTCGCT CTGCGGCGGA
GGGCGGACGG GCGCGCCGCT GGCCCGGGCG CTGCTGATCG CCGCCACGGT GGCCGCGCCG
GCCAGCGAAG CGCTGCCGAT CCCGCTCTAC CCCGACCTCG CCGCCTCGCC CTTCCCGGTC
TCGACGCGCG ATCCGCAGGC GCGGCGCTAT TTCAGCCAGG GCCTGTTGCT CAGCTACGGC
TTCAACCATG CCGGCGCGGT CCGCTCCTTC CGCGAGGCAC AGCGCCTCGA TCCCGACTGC
GCGATGTGCT GGTGGGGCGA GGCGATGGCG CTCGGCCCCA ACATCAACGC CCCGATGGAC
GACCGCGATC GCGACGCGGC CCTCCGCGCG ATGGACCGGG CGATGGCGCT GCGCGGCGGC
GCATCGCCGA TGGAACAGGC GCTGATCGAG GCGATCGCCC GGCGCTATGC GCGCGATCCC
CAGGCGGACC GCGCCGCGCT CGACGCCGCC TATGCCGACG CGATGCTCGA TGCCGCGCGG
CGCTTCCCGG CCGACGACGA CGTCGCGGTG CTCGCCGCCG AAGCCGCGAT GGACACCACC
CCATGGAACT ACTGGGAGGC CGACAGGAAG ACGCCGGTCG GCCGCAGCGG CGACGCCGTC
CGGCTGATCG AGGCCGTCCT CCGGCGCAAC CCGTCGCAGG CCCAGGCGGC CCATCTCTAC
ATCCACCTGC TGGAGGCCAG CGATCCCGAG CGGGCCGAGG CCGCGGCGGA CCGGCTGGCG
GCGCCCCTCC TCCCCAGCGC CGCGCATCTC GTCCACATGC CGGGCCATAT CTACCAGTTG
CGCGGCCGCC ACGCGGATTC GATCCGGGTC AACGTCGCCG CCGCGCGCGC CGACGAGGCA
TTCATCCGCA GCGCCGGCGA TCACGGCATG GTCCGCTACG GCTATTATCC GCACAACATT
CATTTCATCG TGACCAGCGC GCAGATGGCC GGGGACATGC CGACGGCGAT CCGCGAGGCG
CGGCGGCTCA GGACCGTGCT CGATCCGGAA ACCTCGGCGC GGATGGCCTG GATACAGGCG
ATCGACGCCG CCCCCTATTT CGCCATGGCG CAGTTCGCCG AGCCGGCGGC GATCCTCGCT
TTGCCCGCCC CCGATCCGCG CCTGTCCTAT CCGGCGGCGA TGCGCCATTA TGCGCGCGGC
ATCGCCTATG CCCAGCGCCG CGACAAGACC GGCTTCGACC GCGAGATCGC GGCGATGGCC
CGGCTCGGAA CGTCGGACGG AATGAAGGCG ATGGTCGACC AGGGGGTCCC CGCGCCCGAT
CTGGTGCGAC TGGCCGAACT GGTCGCGCGC GGGCGCTTCG CCACTGCGAG CGGCGCCTAT
GACGAGGCGA TCGACTTCTA TCGCCAGGCC GCCGCGATCG AGGCGACCAT TCCCTATCAG
GAGCCCGCCT ACTGGTATTA TCCGGTGCGG CAGTCGCTGG GCGCGGCACT GTTCCTGGCG
GGCCGGCACG ATGCCGCGAG CGATGCCTTC CGCGCCGCGC TCGCCCAGAC CCCGAACAAT
GGCTGGGCGC TCTACGGCCT CGCCCGCAGT GAAGCGGCAC AGGGCCGCAA GCTCGAGGCC
GCGGCGGCGC GAAAGGCCTG GTCGAAGGCC TGGCTGGGCG ATCCGCGCTG GCTCCGCATG
GAGCGGTTGT GA
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| Protein sequence | MARMADRPPR LGAIDFHDSL AGLSLFAFGE RRTAVPHLLK AAALAGVGFS LASFMPPPVF
SAASLDALDP SRIAASLCGG GRTGAPLARA LLIAATVAAP ASEALPIPLY PDLAASPFPV
STRDPQARRY FSQGLLLSYG FNHAGAVRSF REAQRLDPDC AMCWWGEAMA LGPNINAPMD
DRDRDAALRA MDRAMALRGG ASPMEQALIE AIARRYARDP QADRAALDAA YADAMLDAAR
RFPADDDVAV LAAEAAMDTT PWNYWEADRK TPVGRSGDAV RLIEAVLRRN PSQAQAAHLY
IHLLEASDPE RAEAAADRLA APLLPSAAHL VHMPGHIYQL RGRHADSIRV NVAAARADEA
FIRSAGDHGM VRYGYYPHNI HFIVTSAQMA GDMPTAIREA RRLRTVLDPE TSARMAWIQA
IDAAPYFAMA QFAEPAAILA LPAPDPRLSY PAAMRHYARG IAYAQRRDKT GFDREIAAMA
RLGTSDGMKA MVDQGVPAPD LVRLAELVAR GRFATASGAY DEAIDFYRQA AAIEATIPYQ
EPAYWYYPVR QSLGAALFLA GRHDAASDAF RAALAQTPNN GWALYGLARS EAAQGRKLEA
AAARKAWSKA WLGDPRWLRM ERL
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