Gene Swit_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1472 
Symbol 
ID5197222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1622716 
End bp1622967 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content66% 
IMG OID640581020 
Productformate dehydrogenase delta subunit 
Protein accessionYP_001261974 
Protein GI148554392 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0263754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA TGACCAACGA CGAGAAGCTC GTCTATATGG TGAACCAGAT CGCCCGCAAT 
TTCGGGACGC TGGGACATGA CGACGCCGTG GCTGCCACCG AGGATCATCT GCTCAAATTC
TGGGACCCGC GCATGAAGGC GCGGATCGTG ATGCTGATGG CGGAACATGC CGGCACGCTG
AGCCCCGTCG CCTCGGGTGC GCTGTCGCGT CTGCGCGCGG GGATCGGGCC CGGCCTCGCG
GACGCGGGCT GA
 
Protein sequence
MSGMTNDEKL VYMVNQIARN FGTLGHDDAV AATEDHLLKF WDPRMKARIV MLMAEHAGTL 
SPVASGALSR LRAGIGPGLA DAG