| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1426 |
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| Symbol | |
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| ID | 5196756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 1565655 |
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| End bp | 1566419 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580973 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001261928 |
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| Protein GI | 148554346 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0198421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCAG CAGGTCGACT GGCCGGGAAG GTGGCCCTCG TCACCGGCGC GTCGCGCGGG
ATCGGGCGGG CCATTGCCGA GGCCTATGGC CGCGAAGGGG CCCGCGTGAT CGTCAACTAC
GTCGCCGACC AGGCGGCGGC CGAGGCGGTC GTCGACAGGA TCAAGGCGCT GGGCAGCGAT
GCCGTGGCGA TCCAGGCCGA CAGCGCCGAT CCAGCCGCAT TGCGACGGCT GTTCGCACAA
GCCGGCACGG TGTTCGACGG GCTCGATATC GTCGTCAACA ATGCCCATCC CGGCTGGGGG
GAAGGCAAGC CCACCGAATT GAGCGAAGCC GATATCGACC AGCAGCTCGC GGTCCTCAAA
GGCTATATCA TCGCCTTGCA GGAGGCCGGC CGGCGCGTGC GGGATGGCGG CGCCATCATC
TGCATCTCTT CGGGAACCAC GCGGGTAGCG GTCCCCCAGC ATTGCCTCTA CGCGTCGATC
AAGCTTGCGA TCGAGCAAAT GGCCCGCGCG CTGTCGCGGG AAGTCGCCCC GCGCGGCGTT
CGTTCGGTGT CGCTGGCGCC GGGGCTGACC CGTACCGACC GCATCGCCGG TCTCGACGTC
GGCCCGGTCG GATCGGCGCC GATCATGGGC GCGCCCACCC CCTTCACCCG GCCCGGAGAG
CCCGAGGAGG TGGCCGATGC AGCCGTCTTC CTTGCCTCCG ACGAGGCGCG ATGGGTCAAT
ACCACCACGC TCTACGTCAA TGGAGGCGCC GTTTATGCCC AATAG
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| Protein sequence | MTSAGRLAGK VALVTGASRG IGRAIAEAYG REGARVIVNY VADQAAAEAV VDRIKALGSD
AVAIQADSAD PAALRRLFAQ AGTVFDGLDI VVNNAHPGWG EGKPTELSEA DIDQQLAVLK
GYIIALQEAG RRVRDGGAII CISSGTTRVA VPQHCLYASI KLAIEQMARA LSREVAPRGV
RSVSLAPGLT RTDRIAGLDV GPVGSAPIMG APTPFTRPGE PEEVADAAVF LASDEARWVN
TTTLYVNGGA VYAQ
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