Gene Swit_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1412 
Symbol 
ID5200123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1552508 
End bp1552966 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID640580958 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001261914 
Protein GI148554332 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.233929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.168461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCG GCGACGCTTC GCGGACGGGC GGCTGCCTGT GCGGACGAAT CCGCTATCGG 
CTGGCGAGCG CGCCGTTCGA TCCCGGCTAT TGCCATTGCC GCATGTGCCA GCGCTTCGGC
GGCGCGCCGG TGATGGCCTT CGCCTCGGTG CCGCTGGTCG ATTTCCATGT CGAGGCGGGC
GATCCGGTCC GCTACCGATC GTCGGAGATC GGCGAGCGCT GGTTCTGCCG CGACTGCGGC
AGCTCGCTCG CCATGCGGGT CGATCGCGCG CCCGGGCTGA TCGACTTCAC CATGGCGACG
CTCGACGATC CGACCTGGCT GCCGCCCGCC TTCCATATCT GGCGCGAGAG CCGGATCGGC
TGGTTCGACA CGATCGACGC GCTGCCCCGG CACGAACGCG AACGGCCCCG GCCCGTCGCG
CCGAGTCCCG CCGTCGCCGG GCTGCCGCTT CCTTCCTGA
 
Protein sequence
MTAGDASRTG GCLCGRIRYR LASAPFDPGY CHCRMCQRFG GAPVMAFASV PLVDFHVEAG 
DPVRYRSSEI GERWFCRDCG SSLAMRVDRA PGLIDFTMAT LDDPTWLPPA FHIWRESRIG
WFDTIDALPR HERERPRPVA PSPAVAGLPL PS