Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_1400 |
Symbol | |
ID | 5198099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 1542504 |
End bp | 1543298 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640580946 |
Product | hypothetical protein |
Protein accession | YP_001261902 |
Protein GI | 148554320 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.452797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.148834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTT TCTCGCTGGG AACGGTCTGG GAAGAAACGA TCGCCTTCCT GCGCCGGGAG AGCGGGCTGC TCATCCCCGT CGCGCTGGCG GTCTATGGCC CGGCGCAGCT CCTGTTCGAC GTCGGCATGC AGGCGCTGAT GTCGATGCGC GGCGCGGCCG AGGCCGTGCC GTCGTGGCAG GCGCTGCTGG TCGTGCCGGG CGGCCTGCTG ATGCTGCTCG GCAATCTCGT CGTGTCGCTG CTGGTCATCG CGCCGGGGAT CAGCGTCGGC GAAGCGCTGT CGGCGGGGCT GCGGCGGCTG CCGACCGCGC TGGCGGCGAT GCTGCTGCTC GGCGTCGCCA TCCTCGCGGT GATGCTCGCG ATCGTCGTCG CGGCGACGCT GGGCGCGGTC ACCTTCAAGG CCGATCCCCG CTCGCCGGTG ATCGCCAGCC AGCTCCTCGT CCTGATCATG ATCCCGATCG GCCTGTTGTG GCTGCGCCTG CTGCTGCTGC CGACGGTGAT CGCGGTCGAG CCGCTCGGCG CGATCGACGC GATCCGGCGG GCCTGGGCGC TCGGCCGGGC CAATGTGCTG CGGCTGCTCG GCGTCTGGCT GCTGCTGCTG TTCCTCAGCA TCGTGCTGGC AATGATCGAG ATGTTCGTGG TCGGATCGCT GACCGAGCTG CTCAAGCTCG GCATCGGCGA CATCGGCCTC GCCTCGGCGA TCCAGATGGT CGCCAACGCC GCGCTCGAAG CGCTGCTGTC GATGGGCCTC GCGGTCTACC TGGCGCTGGT CTACCGGACG CTCGCCCCGC GCTGA
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Protein sequence | MTAFSLGTVW EETIAFLRRE SGLLIPVALA VYGPAQLLFD VGMQALMSMR GAAEAVPSWQ ALLVVPGGLL MLLGNLVVSL LVIAPGISVG EALSAGLRRL PTALAAMLLL GVAILAVMLA IVVAATLGAV TFKADPRSPV IASQLLVLIM IPIGLLWLRL LLLPTVIAVE PLGAIDAIRR AWALGRANVL RLLGVWLLLL FLSIVLAMIE MFVVGSLTEL LKLGIGDIGL ASAIQMVANA ALEALLSMGL AVYLALVYRT LAPR
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