Gene Swit_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1400 
Symbol 
ID5198099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1542504 
End bp1543298 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID640580946 
Producthypothetical protein 
Protein accessionYP_001261902 
Protein GI148554320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.452797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.148834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTT TCTCGCTGGG AACGGTCTGG GAAGAAACGA TCGCCTTCCT GCGCCGGGAG 
AGCGGGCTGC TCATCCCCGT CGCGCTGGCG GTCTATGGCC CGGCGCAGCT CCTGTTCGAC
GTCGGCATGC AGGCGCTGAT GTCGATGCGC GGCGCGGCCG AGGCCGTGCC GTCGTGGCAG
GCGCTGCTGG TCGTGCCGGG CGGCCTGCTG ATGCTGCTCG GCAATCTCGT CGTGTCGCTG
CTGGTCATCG CGCCGGGGAT CAGCGTCGGC GAAGCGCTGT CGGCGGGGCT GCGGCGGCTG
CCGACCGCGC TGGCGGCGAT GCTGCTGCTC GGCGTCGCCA TCCTCGCGGT GATGCTCGCG
ATCGTCGTCG CGGCGACGCT GGGCGCGGTC ACCTTCAAGG CCGATCCCCG CTCGCCGGTG
ATCGCCAGCC AGCTCCTCGT CCTGATCATG ATCCCGATCG GCCTGTTGTG GCTGCGCCTG
CTGCTGCTGC CGACGGTGAT CGCGGTCGAG CCGCTCGGCG CGATCGACGC GATCCGGCGG
GCCTGGGCGC TCGGCCGGGC CAATGTGCTG CGGCTGCTCG GCGTCTGGCT GCTGCTGCTG
TTCCTCAGCA TCGTGCTGGC AATGATCGAG ATGTTCGTGG TCGGATCGCT GACCGAGCTG
CTCAAGCTCG GCATCGGCGA CATCGGCCTC GCCTCGGCGA TCCAGATGGT CGCCAACGCC
GCGCTCGAAG CGCTGCTGTC GATGGGCCTC GCGGTCTACC TGGCGCTGGT CTACCGGACG
CTCGCCCCGC GCTGA
 
Protein sequence
MTAFSLGTVW EETIAFLRRE SGLLIPVALA VYGPAQLLFD VGMQALMSMR GAAEAVPSWQ 
ALLVVPGGLL MLLGNLVVSL LVIAPGISVG EALSAGLRRL PTALAAMLLL GVAILAVMLA
IVVAATLGAV TFKADPRSPV IASQLLVLIM IPIGLLWLRL LLLPTVIAVE PLGAIDAIRR
AWALGRANVL RLLGVWLLLL FLSIVLAMIE MFVVGSLTEL LKLGIGDIGL ASAIQMVANA
ALEALLSMGL AVYLALVYRT LAPR