Gene Swit_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1392 
Symbol 
ID5198764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1536261 
End bp1536761 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID640580938 
Producthypothetical protein 
Protein accessionYP_001261894 
Protein GI148554312 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.234171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGGC TCGCGCTGTC GTGCGCGGCG CTGCTTCTGG TCGCGGACCC CATGCCTGCG 
ACGGCAGCCC ATTGGTGGGA AGCGGGACCG CCGCTGCCGG CGCAGACGGG ACGGGTGACC
GACGAGGCCC GCTTGCTGCC GCCCGCCGTC GCCCGCGACA TCGATCGGCG GCTCGCTCGA
TTGGAGGCGA CCACGGGCCA TCAGTTCGTT GTGCTGACAG TGCCCAGCCT GCGCGGCCAG
CGGATCGAGG ATTTCGGGAC TAGGGTCGGA CGAAGCTGGG GAGTGGGCCG CAAGGGCATC
GACGACGGCG TGCTGCTGAT CGTCGCGCCG AACGAGCGGA AGGTGCGGAT CGAGGTGGGC
TACGGCCTGG AGAAAGCGCT CAGCGATCCG GTCTGCGCGA CGATCATCCG CGACACGATC
CTGCCGCGCT TTCGGAAGGG CGACATGGCC GGCGGAATCA GCGCGGGCGT GAACGCCATC
ATCGCGCGGA TCGGCAAATA G
 
Protein sequence
MKRLALSCAA LLLVADPMPA TAAHWWEAGP PLPAQTGRVT DEARLLPPAV ARDIDRRLAR 
LEATTGHQFV VLTVPSLRGQ RIEDFGTRVG RSWGVGRKGI DDGVLLIVAP NERKVRIEVG
YGLEKALSDP VCATIIRDTI LPRFRKGDMA GGISAGVNAI IARIGK