Gene Swit_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1361 
Symbol 
ID5199148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1507720 
End bp1508976 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content71% 
IMG OID640580908 
Producthypothetical protein 
Protein accessionYP_001261864 
Protein GI148554282 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.841061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCA ACGACACCCG ATCCGACCCT GCCGCCCGCC CCCGCCGAAG GGGCCCCGGC 
CTGGGACGCC TGCTGACCGC CTTGCCGCTG CTCGCGGTCG CCTGCTTCAC CTTCGGCGGC
AGTGCGCCGG CGGGCATGCC GTCGCCCGAA AGCGTCGCCG CGGCGCCCGA CCGGATGCCG
GGCCGATGGT CGCTCGGCAG CGCCCGCGAC CTGCTCGCCG TCATCGAGGA TTCGGCGGAG
GAAGGGCTGA ATCCGTCCGA TTACAATGCC GACGCGCTGC GCGCCGCGAT CGAAGCCAGA
CGGAAGGGCC CGGCGCTCGA TGCGCTCGCC ACGGCTTCGG CGCTGCGGAT CGCGCACGAC
TATGCCAATG GCCGGATCGA CGACAAGGCG GCGCTCGACT GGCATATCGC CCCGCCCGCC
GATCCCAATC GCATCGCCGC CGGCCTCGCC GAGGCGCTCG ACCGCGACCG GCTCGGCCCA
TGGCTGCGCG GCCTGCTGCC AGACAACGAC CAGTATCGCG CGCTTAGGGC CGCCTATGCC
GACGCGCGCG GCGACGAGGC GCTGCGCGGC CGGCTCCGCG CCAATCTCGA ACGCTGGCGC
TGGATGCCGC GCGACCTCGG CGATCGCTAC ATCTACGTCA ACATCCCCGG CTACCGCCTG
TCGGTGATCA ACAACGGGAT CGAGGAAGCG AGCTACAACG TCGTGGTCGG CGCCCCCAGG
ACGCCGACGC CGCAGCTCGA GCTCTATGCC CAGTCGATCG TCGCCAATCC CGGCTGGACG
GTGCCGCACA GCATCGTCAA GGCGGGCGGG ACGCGCGGCA AGGGCTTCCG CTGGATCCGC
AACCCGGACG GCAGCGTCTC GGCCTGGCAG GCGCCGGGAC CGACCAATGC GCTCGGCCGG
ATCAAGATCG ACATGCCGAA CCCGCATGCC ATCTACCTGC ACGACACGCC CAACCGCGCG
GTCTTCGCGC GCGAGAACCG CGCGCTCAGC CATGGCTGCA TCCGGGTCGA GAATATCGAG
GAACTGGCCG CGATGCTCCA GGGCGGCGAC GGCCTCGACG CGGCGCTCGC CGATCCGGGC
AAGACGAAGG TCTTCCAGCT CGAACGGAGC GTGCCGGTCT ACCTCGTCTA CTTCACCGCG
CAGGCCGATC CCGACGGCAC CGTCCGCCCG CTCGGCGATC CCTATGGCCG CGACAAGGCA
CTGCTCGCGA AGCTGGGCGC GGCGATGGAA GGGAAGCTCC AGGTCGCGGG CCGCTGA
 
Protein sequence
MSRNDTRSDP AARPRRRGPG LGRLLTALPL LAVACFTFGG SAPAGMPSPE SVAAAPDRMP 
GRWSLGSARD LLAVIEDSAE EGLNPSDYNA DALRAAIEAR RKGPALDALA TASALRIAHD
YANGRIDDKA ALDWHIAPPA DPNRIAAGLA EALDRDRLGP WLRGLLPDND QYRALRAAYA
DARGDEALRG RLRANLERWR WMPRDLGDRY IYVNIPGYRL SVINNGIEEA SYNVVVGAPR
TPTPQLELYA QSIVANPGWT VPHSIVKAGG TRGKGFRWIR NPDGSVSAWQ APGPTNALGR
IKIDMPNPHA IYLHDTPNRA VFARENRALS HGCIRVENIE ELAAMLQGGD GLDAALADPG
KTKVFQLERS VPVYLVYFTA QADPDGTVRP LGDPYGRDKA LLAKLGAAME GKLQVAGR