Gene Swit_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1320 
Symbol 
ID5200632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1476505 
End bp1476873 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID640580867 
ProductDGPFAETKE family protein 
Protein accessionYP_001261823 
Protein GI148554241 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.746126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.587484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTGA TGGTTCTGGT AAAGGCGACC GAGGACAGCG AGCAGGGCTT CCGGCCGACC 
CCCGAGGCGC TCGCGATGTT CGAGGCGATG GGCAAGTTCA ACGATGAACT GGTCAAGGCC
GGCATCATGG TCTCGGGCGA CGGCCTCACC CCCTCTTCGC GCGGCAAGCG CGTTGCGTTC
GACGGTCCCG GACGGACGGT CATCGACGGA CCCTTCGCCC ATCCCAACGA ACTGGTCGCC
GGCTTCTGGC TCTGGCAGGT CAAGGACATG GATGAGGCGG TCGCCTGGGT GAAGCGCTGC
CCCAATCCTA TGATGGGACC GAGCGAGATC GAGATCCGGC CGCTGTACGA GCTCGAAGAC
CTGCAATGA
 
Protein sequence
MRVMVLVKAT EDSEQGFRPT PEALAMFEAM GKFNDELVKA GIMVSGDGLT PSSRGKRVAF 
DGPGRTVIDG PFAHPNELVA GFWLWQVKDM DEAVAWVKRC PNPMMGPSEI EIRPLYELED
LQ