| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1305 |
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| Symbol | |
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| ID | 5200533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1460994 |
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| End bp | 1462520 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640580852 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001261808 |
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| Protein GI | 148554226 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.855979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCCG CCGCCCCTCC CGAGCTCCCG CCCGGATCGC GCCAGGTCGC CAAGGGCGCT
GGCACCGCGC TGCTGGCGCG GGCCGGCGGC GTCATCGAGA TCGTTTCCCA GCCGCTCTAT
GTCTGGCTGT TCGGCCTGCC GACCTACGGC CTCTACATGG TGCTGTGGTC GGCGGTGAAC
CTGATCGAGA ACATCGCCGA CATGGGGATG ACCAGTGCGC TGCAGCGCGT CGTGCCGCAA
GCGCGAGACG ATGCCGAGCG CGCCGCCGCG CTGCGCCAGG CGATGCTGCT CGGCCTCGGG
CCCTGCATCC TCATCGCCCT GCTCGTCAGC CTCGGCGCGC ACCGGATCGC CGAGGTGGTC
AACGTCGCCG CCAAGGATCG CGACGAACTG GCGACCGGCA TCGCGATCTT CGCCTGGGCC
CTCCCCTTCT GGGCCTATGT CGAGATCGCG ACCTCCGCGC TGCGCGCGCG CAAGGCGTTC
GGGCCGGAGA TCCGCCTGAG GGTGATGTGG GAACAGATCC TCCGTATGAT CGCCGCGACG
CTGCTCGCGG CGCTCGGCGC CGGCACGCTC GGCCTGCTGA TCGCGCATCT CTGCTCGCTG
GCGATCACCT GCGTCTTCTC GACCCGGCTG CTCGCCCGCT ATTACCGGCT CGACCTCGTG
CTGCGCGGGG CCGGGCCGTC GATGCGGGCG AAGACCTTCT ACGCCGGCAT CTCGGTGCTG
CCGTCGAACA TCGTCAACCG GCTGTTCAGC GACGCGCCGC CGCTGATCCT CAACCTGATC
ATCCCGGGCG CCGCCGGGGC CAGCGCCGCC GGCCTGTTCG CGATCGCGCG CAAGATCGCC
AGCGGCGTCC AGCTCATCCG CCAGGCCTTC TCCTATGTGA TGGCGCCGCT CGCCTCCGAA
GCGGTGCGCC ACGACATCCG CCACGTCGCC GAGATCTACG GCTTCGCCAC CCGGCTCACC
ATCGTCGTCG CGACGCCGGT GGTCTGCACC ATCGCCGGCG GCGGCCGGGC GCTGCTCGCG
CTGTTCGGCA GCGGCGCGCA GGCCGCCTAT CTGGCGCTCG CGCTGCTCAC CTTCACCCGG
CTGATCGAGG CGGTGGCGGG CCAGGCCTCG GCGATCCAGT CGGTGATCAG CCGCTATCAT
CATCCGCTGG TCGGCAGCGC GATCGGGCTG GCCGTGTCGC TGGCGCTCGG CGCGCTGCTG
CTGCCGCAGG GCGGGATGGA CGGCATGGCG ATCGCGGTGT CGGCGGGCAT CGCGGTATCG
GTGCTGACCC CGATGGTCCA GCTCTGGCAC CACCAGCACC TCCATCCCTT CGCCCCGCCC
TTCGCCCGCG CCGCGGCGGT GGCGGCAGCG GTCGGCGCGG TGATCTTCCT GCTCTCCGAA
CTGCTCGGGC CGCTCCACCA TGTCGTCCGC ATCGCGATCG GCGCGGTGCT GCTGGTTGCC
GGCATCTGGG TCTCGGGCCG CTTCGGCCTC AGCCATGACG ACAAGCTGGC GCTGGGCAAG
ACGGCGCGGA AGCTGCGGCT GCTATAG
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| Protein sequence | MSSAAPPELP PGSRQVAKGA GTALLARAGG VIEIVSQPLY VWLFGLPTYG LYMVLWSAVN
LIENIADMGM TSALQRVVPQ ARDDAERAAA LRQAMLLGLG PCILIALLVS LGAHRIAEVV
NVAAKDRDEL ATGIAIFAWA LPFWAYVEIA TSALRARKAF GPEIRLRVMW EQILRMIAAT
LLAALGAGTL GLLIAHLCSL AITCVFSTRL LARYYRLDLV LRGAGPSMRA KTFYAGISVL
PSNIVNRLFS DAPPLILNLI IPGAAGASAA GLFAIARKIA SGVQLIRQAF SYVMAPLASE
AVRHDIRHVA EIYGFATRLT IVVATPVVCT IAGGGRALLA LFGSGAQAAY LALALLTFTR
LIEAVAGQAS AIQSVISRYH HPLVGSAIGL AVSLALGALL LPQGGMDGMA IAVSAGIAVS
VLTPMVQLWH HQHLHPFAPP FARAAAVAAA VGAVIFLLSE LLGPLHHVVR IAIGAVLLVA
GIWVSGRFGL SHDDKLALGK TARKLRLL
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