| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1185 |
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| Symbol | |
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| ID | 5199157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1346944 |
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| End bp | 1348386 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640580732 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001261689 |
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| Protein GI | 148554107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.170732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.829562 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCG ACACCCCGCC GGGGCTCTTG CTGATCGATG CCGAACCGGC GCAGGCCGGG
CTGATGAGCG CACTGGCGCA GCGGGCCGGA TGGCGCGTGC TCCGTGCCGC CGACGTCGCC
GAGGCGGTCG AGCGGTCGGG CAATGCCGAT ATTCGGCTCG ACGCGGCGCT GATCGACCTG
TGGTCGCCCG ACGAGGCGTC GGTGCGATCG GTCGCCCGGC TGCGCGAGAG CCTGCCCGCG
CTTCCGATCA TCGTCGTCAC CGCCCAGGAT TCGGTCGATC TCGCGGTGCG CGCCGTCCGC
GCGGGGGCGC ACGACGTGCT CGTCAAGCCG ATCGCCCGCC ACCGGCTGCT CGCCGCGCTC
GACCATGTCG TTGCCGACGA CCCGCCCGCC GGCGAACTCC GGCCGCTGGT CGAGAAATGG
TCCGAGGCGC TCGATTTCGC GGAGATCGTC GGGTCGGCCC CATCCTTCCG CCGCGCGCTC
GACGTGGCGA TGCGCGCCGC CGCGACCCCC GCGACGATCC TGATCGAGGG CGAGAGCGGC
GTCGGCAAGG AACTGCTCGC CCAGGCGATC CACCGCGCCT CGGCCCGCCA GGCCGGCCCG
CTGATCACCG TCAACTGCGC GGCGATCCCC GCCAACCTCG TCGAATCCGA ACTGTTCGGC
CATGAGCGTG GCGCCTTCAC CGGCGCCTTC GAGCGCCGGC CGGGGCTGTT CGCCGACGCC
GACGGCGGGA CGATCTTCCT CGACGAGATC GGCGACCTGC CGGGCGATGC GCAGGCGAAG
CTGCTGCGCG TGCTCCAGTC GGGCGAGATC CGGCCGATCG GCGCGACCCG GCCGCGCCAG
GTGTCGGTGC GCGTCATCGC CGCGACCAAC CGCCGCCTGT CCGACGACGT CGCGCGCGGA
CGCTTCCGCG AGGACCTGTT CTACCGGCTC GCGGTGGTGC CGCTGACCCT GCCCGCGCTG
CGCGACCGGA TCGGCGACGT CGCCCCGCTC GCCGCGCATC TGCTCGACCG GATCGCCCGC
CAGCTCGGCC TGCCGGGGCT CGCCGTCGAT GCGTCAGCGA TCGCGCTGCT CGAAACCCAT
GACTGGCCGG GCAATGTCCG CCAGCTCCAC AACGTCCTGT TCCGCGCGGC GATCTTCCGC
GATGGCGGCA CCCTGACCGC ATCCGATTTC CCGCAATTGC GCGCCGCCCA TGCCGGCCCG
CAGCCGGCGG CGAACGACGA TGCTCCGGTG CCGGCGGACG CCGCCGCCCC GCCCGCCGGG
AGCCTCGCGC TGTTCGGCGC CGACGGCCAT GTCCGCCCGA TCGACGAGAT CGAGGCCGAC
CTGATCCGCC TGGCGATCGG CCATTATCGC GGCCGGATGA CCGAAGTCGC CCGCCGCCTG
CGGATCGGCC GATCGACGCT CTACCGCAAG CTCGGCGAAC TGGGGATCGA GCAGGCGGGG
TAG
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| Protein sequence | MRRDTPPGLL LIDAEPAQAG LMSALAQRAG WRVLRAADVA EAVERSGNAD IRLDAALIDL
WSPDEASVRS VARLRESLPA LPIIVVTAQD SVDLAVRAVR AGAHDVLVKP IARHRLLAAL
DHVVADDPPA GELRPLVEKW SEALDFAEIV GSAPSFRRAL DVAMRAAATP ATILIEGESG
VGKELLAQAI HRASARQAGP LITVNCAAIP ANLVESELFG HERGAFTGAF ERRPGLFADA
DGGTIFLDEI GDLPGDAQAK LLRVLQSGEI RPIGATRPRQ VSVRVIAATN RRLSDDVARG
RFREDLFYRL AVVPLTLPAL RDRIGDVAPL AAHLLDRIAR QLGLPGLAVD ASAIALLETH
DWPGNVRQLH NVLFRAAIFR DGGTLTASDF PQLRAAHAGP QPAANDDAPV PADAAAPPAG
SLALFGADGH VRPIDEIEAD LIRLAIGHYR GRMTEVARRL RIGRSTLYRK LGELGIEQAG
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