| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_1145 |
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| Symbol | |
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| ID | 5196357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 1289130 |
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| End bp | 1290653 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640580692 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001261649 |
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| Protein GI | 148554067 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.503144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.675575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC CCGCCTTCCA CGAACTCGTC ACTGGCCGGC GGCGCTTCGT CGCGGGGATC
GCGCTGGCGT CGGTCAACCT GATGGTCGTG CTCGACATGA CCATCGCCAA CGTCTCGGTC
CCGCATATCT CCGGCAATCT CGGCATCTCG CCGAACCAGG GCACCTGGGT GATCACCTCC
TATGCGGTGG CGGAGGCGAT CTGCGTGCCG CTGACCGGCT GGCTGGCGCA GCGCTTCGGA
TCGGTCCGGG TCTTCATCCT CAGCATCCTC GGCTTCGGCC TGTTCTCGGT GCTGTGCGGC
CTGTCGACGA CGCTCGGCAT GCTGGTCGCC TGCCGCATCG GCCAGGGCCT GTCCGGCGGG
CCGCTGATCC CGCTCACCCA GACGCTGCTG ATGCGCATCT TCCCACCCGA CAAGCGCGCC
CGCGCGATGG GGATGTGGGC GATGACGACG CTGGTCGGCC CGGCGCTGGG ACCGATCCTG
GGCGGCTGGA TCAGCGACAA TTGGAGCTGG CACTGGATCT TCTTCATCAA CGTGCCGGTG
GTGCTGTTCA GCGCCGGCGT GAGCTATTCC TTCCTCCGCG TCATCGAGAC GCCGATGGAG
AAGCTGCCGA TCGACCGCAT CGGCCTGGCG CTGATGATCC TGTGGATCGG CGCGCTCCAG
ATCATGCTCG ACATCGGCCG CGAGCATGAC TGGTTCGCCG ACACGACCGT GCTGGGGCTC
GCGCTGTTCG CCGCGATCAT GTTCGTCGTC TTCGTGATCT GGGAGCTGAC CGAGGAGCAT
CCGATCGTCG ACCTGCGCGT CTTCCGCCAT CGCGGCTTCA CGATCAGCGC GCTGACCATC
GCCTTCGGCT TCGGCACCTA TTTCGCCGGC ATCGTCGTGA TCCCGCAATG GATGCAGATC
ACGCTGGGCT TCACCGCCAC CTGGGCGGGC ATCGCGACGG CCTTCACCGG CATGGCGGGG
CTGTTCGTCG GACGGCTGGC GCCGATCCTG ATCACCAGGA TCGACCCGCG CATCGTCCTG
TCCGGCGCGC TGCTCTGGGC GGGCGGCGCC ACGCTGCTGC GCACCAACTG GACGAGCGGC
TCCGACTTCT GGACGCTCGG CCTGCCGCAG TTCATCATGG GCCTGGGCAT GCCCTTCTTC
TTCGTGACGG CGACGTCGAT GTCGCTGAGC GCGGTGCCGC CCAAGGAGCT CGCCTCGGCG
GCGGGACTCC AGAACTTCCT GCGGATCATG GGGGTCGCGG TATCGACCTC GGTGGTCATG
ACCTATTGGA ACGACCAGGC GCGCGTCGCC GGGAGCGAGC TGGCCGGCCG GCTCAATCCC
GACGGCCCGG GCGGCACGAT CGCCGGCTTC TCGGTCGAGC AATCGCGCGC GCTGATGGCG
CAGCTCGTCG ACCGCGAGGC GCTGACCATC GCGACCGACA AGATATTCCT GATCGCCGGG
CTGCTGATGT GGCTGATCGC CGCCTTCGTC TGGCTGGCGC CGAAGCCCAA GCGCATGGCC
GATCCGATGG CCGGCGGGCA CTGA
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| Protein sequence | MAEPAFHELV TGRRRFVAGI ALASVNLMVV LDMTIANVSV PHISGNLGIS PNQGTWVITS
YAVAEAICVP LTGWLAQRFG SVRVFILSIL GFGLFSVLCG LSTTLGMLVA CRIGQGLSGG
PLIPLTQTLL MRIFPPDKRA RAMGMWAMTT LVGPALGPIL GGWISDNWSW HWIFFINVPV
VLFSAGVSYS FLRVIETPME KLPIDRIGLA LMILWIGALQ IMLDIGREHD WFADTTVLGL
ALFAAIMFVV FVIWELTEEH PIVDLRVFRH RGFTISALTI AFGFGTYFAG IVVIPQWMQI
TLGFTATWAG IATAFTGMAG LFVGRLAPIL ITRIDPRIVL SGALLWAGGA TLLRTNWTSG
SDFWTLGLPQ FIMGLGMPFF FVTATSMSLS AVPPKELASA AGLQNFLRIM GVAVSTSVVM
TYWNDQARVA GSELAGRLNP DGPGGTIAGF SVEQSRALMA QLVDREALTI ATDKIFLIAG
LLMWLIAAFV WLAPKPKRMA DPMAGGH
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