Gene Swit_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1089 
Symbol 
ID5199559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1221040 
End bp1222077 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID640580635 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001261593 
Protein GI148554011 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.940602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCCTT TGCACCCGCT CGCCCCACCC GCTAAAGCAG CGCGCATGAC TCAGCCCGCC 
TTTCCCGCGC TTCGCCTGCG CCGTCCGCGC CGCCATGGTT GGAGCCGCGC GCTCTTCGCC
GAGAATGTCC TCACCCCCGC CGATCTGATC TGGCCGCTGT TCATCGCCAA TGGCGACGAG
GTCGAGCCGA TCGCCTCGCT GCCGGGCGTC TCGCGCTGGC CGCTCGCGCA GATCGCGGCG
CGGGCGAAGG AGGCGCGCGA CGCCGGCATT CCCTGCCTGG CGCTGTTCCC CAACACGCCG
CGCGACCGGC GCAGCGACGA CGGGCGCGAG GCGCTCAACC CCGACAATCT GATGTGCCGG
GCGATCCGCA CGATCAAGGA CGCGGTGCCC GACATCGGCG TGCTGACCGA TGTCGCGCTC
GATCCCTACA CCACCCACGG CCATGACGGC CTGGTCGACG CCGGCGGCCA TGTCCTCAAC
GATCCCACCA AGGAGGTGCT GGTCGGCCAG GCGCTGGTCC AGGCCGAGGC GGGCAGCGAC
ATCGTCGCCC CCTCCGACAT GATGGACGGC CGGGTCGGCG CGATCCGCGA AGCGCTCGAG
GCCGGCGGGC ATGTCGACGT GCAGATCATG GCCTATGCGG CCAAATATGC CTCCGCCTTC
TACGGCCCGT TCCGCGACGC GGTCGACACG CGCGGCCTGC TCAAGGGCGA CAAGAAGGGC
TATCAGATGA ACCCCGCCAA TGCCGAGGAG GCGCTGCGCG AGGTGGCGCT GGACCTGGCC
GAGGGCGCCG ACAGCGTGAT GGTGAAGCCG GGCCTGCCCT ATCTCGACAT TGTCCGCCTG
GTGAAGGAGC GGTTCGAGGT GCCGGTGTTC GCCTATCAGG TGTCGGGCGA ATATGCGATG
ATCGAGCTGG CGGTCGCCGC CGGCGCCGCC GACCGCGACG CGATGGTGCT GGAGACGCTG
ATGGCGTTCA AGCGCGCCGG CGCGTCGGGC GTGCTCAGCT ATCACGCGCT GCACGCGGCG
CGCCTGATGG GCGCATGA
 
Protein sequence
MAPLHPLAPP AKAARMTQPA FPALRLRRPR RHGWSRALFA ENVLTPADLI WPLFIANGDE 
VEPIASLPGV SRWPLAQIAA RAKEARDAGI PCLALFPNTP RDRRSDDGRE ALNPDNLMCR
AIRTIKDAVP DIGVLTDVAL DPYTTHGHDG LVDAGGHVLN DPTKEVLVGQ ALVQAEAGSD
IVAPSDMMDG RVGAIREALE AGGHVDVQIM AYAAKYASAF YGPFRDAVDT RGLLKGDKKG
YQMNPANAEE ALREVALDLA EGADSVMVKP GLPYLDIVRL VKERFEVPVF AYQVSGEYAM
IELAVAAGAA DRDAMVLETL MAFKRAGASG VLSYHALHAA RLMGA